Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 MST1L-201ENST00000442552 2185 ntBASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 CNN2P8-201ENST00000421872 913 ntBASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 FAM21FP-201ENST00000426241 1131 ntBASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 AC025279.2-201ENST00000569730 653 ntBASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 MIR4525-201ENST00000580000 75 ntBASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 AC145423.3-201ENST00000615987 467 ntBASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 AL391005.1-201ENST00000623953 2435 ntBASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.01□□□□□ -0.17
RNFT1Q5M7Z0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 TUBB1P2-201ENST00000422712 1306 ntBASIC14□□□□□ -0.17
RNFT1Q5M7Z0 TUBB1P1-201ENST00000503144 1300 ntBASIC14□□□□□ -0.17
RNFT1Q5M7Z0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 PGGT1BP2-201ENST00000398621 1028 ntBASIC14□□□□□ -0.17
RNFT1Q5M7Z0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 AL355994.2-201ENST00000447882 704 ntBASIC14□□□□□ -0.17
RNFT1Q5M7Z0 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 RN7SL219P-201ENST00000582872 296 ntBASIC14□□□□□ -0.17
RNFT1Q5M7Z0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 RHOXF1P1-202ENST00000635473 501 ntBASIC14□□□□□ -0.17
RNFT1Q5M7Z0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 AL138709.1-201ENST00000614840 1693 ntBASIC14□□□□□ -0.17
RNFT1Q5M7Z0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNFT1Q5M7Z0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RNFT1Q5M7Z0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms