Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 RPSAP43-201ENST00000402237 625 ntBASIC15.27■□□□□ 0.04
SGO1Q5FBB7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SGO1Q5FBB7 UPF3AP3-201ENST00000420996 769 ntBASIC15.27■□□□□ 0.04
SGO1Q5FBB7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.27■□□□□ 0.04
SGO1Q5FBB7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.27■□□□□ 0.04
SGO1Q5FBB7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
SGO1Q5FBB7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.27■□□□□ 0.04
SGO1Q5FBB7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.27■□□□□ 0.04
SGO1Q5FBB7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SGO1Q5FBB7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.27■□□□□ 0.04
SGO1Q5FBB7 AC092865.5-201ENST00000545435 363 ntBASIC15.27■□□□□ 0.04
SGO1Q5FBB7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.27■□□□□ 0.04
SGO1Q5FBB7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SGO1Q5FBB7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.27■□□□□ 0.04
SGO1Q5FBB7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.04
SGO1Q5FBB7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SGO1Q5FBB7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SGO1Q5FBB7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SGO1Q5FBB7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.27■□□□□ 0.03
SGO1Q5FBB7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SGO1Q5FBB7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SGO1Q5FBB7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SGO1Q5FBB7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.27■□□□□ 0.03
SGO1Q5FBB7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.27■□□□□ 0.03
SGO1Q5FBB7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 AC211486.1-202ENST00000416371 468 ntBASIC15.26■□□□□ 0.03
SGO1Q5FBB7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 AC211476.1-201ENST00000503899 468 ntBASIC15.26■□□□□ 0.03
SGO1Q5FBB7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 BANF1P1-201ENST00000553684 263 ntBASIC15.26■□□□□ 0.03
SGO1Q5FBB7 AC026150.2-201ENST00000564693 1156 ntBASIC15.26■□□□□ 0.03
SGO1Q5FBB7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SGO1Q5FBB7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 AL607033.1-201ENST00000623900 1599 ntBASIC15.25■□□□□ 0.03
SGO1Q5FBB7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 GPS2P2-201ENST00000430745 888 ntBASIC15.25■□□□□ 0.03
SGO1Q5FBB7 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 AP000344.2-201ENST00000512987 629 ntBASIC15.25■□□□□ 0.03
SGO1Q5FBB7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 HNRNPUP1-201ENST00000554987 333 ntBASIC15.25■□□□□ 0.03
SGO1Q5FBB7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 MIR4453-201ENST00000584019 89 ntBASIC15.25■□□□□ 0.03
SGO1Q5FBB7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SGO1Q5FBB7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms