Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.34□□□□□ -0.11
PUDPQ08623 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PUDPQ08623 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PUDPQ08623 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
PUDPQ08623 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.34□□□□□ -0.11
PUDPQ08623 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.34□□□□□ -0.11
PUDPQ08623 CNN2P11-201ENST00000429351 262 ntBASIC14.34□□□□□ -0.11
PUDPQ08623 GPS2P2-201ENST00000430745 888 ntBASIC14.34□□□□□ -0.11
PUDPQ08623 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.34□□□□□ -0.11
PUDPQ08623 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.34□□□□□ -0.11
PUDPQ08623 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.34□□□□□ -0.11
PUDPQ08623 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.34□□□□□ -0.11
PUDPQ08623 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.34□□□□□ -0.11
PUDPQ08623 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.34□□□□□ -0.11
PUDPQ08623 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.34□□□□□ -0.11
PUDPQ08623 AC134684.3-201ENST00000641758 218 ntBASIC14.34□□□□□ -0.11
PUDPQ08623 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.34□□□□□ -0.11
PUDPQ08623 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.34□□□□□ -0.11
PUDPQ08623 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PUDPQ08623 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
PUDPQ08623 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.34□□□□□ -0.11
PUDPQ08623 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
PUDPQ08623 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
PUDPQ08623 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PUDPQ08623 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PUDPQ08623 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PUDPQ08623 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
PUDPQ08623 KRT8P37-201ENST00000451609 1420 ntBASIC14.33□□□□□ -0.11
PUDPQ08623 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
PUDPQ08623 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PUDPQ08623 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
PUDPQ08623 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.33□□□□□ -0.12
PUDPQ08623 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PUDPQ08623 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.33□□□□□ -0.12
PUDPQ08623 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PUDPQ08623 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PUDPQ08623 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PUDPQ08623 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PUDPQ08623 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PUDPQ08623 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PUDPQ08623 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PUDPQ08623 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.33□□□□□ -0.12
PUDPQ08623 SPDYE14P-201ENST00000442619 822 ntBASIC14.33□□□□□ -0.12
PUDPQ08623 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.33□□□□□ -0.12
PUDPQ08623 AC004967.1-201ENST00000453589 447 ntBASIC14.33□□□□□ -0.12
PUDPQ08623 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.33□□□□□ -0.12
PUDPQ08623 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.33□□□□□ -0.12
PUDPQ08623 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.33□□□□□ -0.12
PUDPQ08623 SNHG9-202ENST00000564014 471 ntBASIC14.33□□□□□ -0.12
PUDPQ08623 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PUDPQ08623 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PUDPQ08623 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PUDPQ08623 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PUDPQ08623 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PUDPQ08623 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PUDPQ08623 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PUDPQ08623 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.33□□□□□ -0.12
PUDPQ08623 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.33□□□□□ -0.12
PUDPQ08623 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PUDPQ08623 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PUDPQ08623 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.33□□□□□ -0.12
PUDPQ08623 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.32□□□□□ -0.12
PUDPQ08623 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PUDPQ08623 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PUDPQ08623 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PUDPQ08623 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PUDPQ08623 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PUDPQ08623 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PUDPQ08623 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.32□□□□□ -0.12
PUDPQ08623 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PUDPQ08623 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PUDPQ08623 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PUDPQ08623 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.32□□□□□ -0.12
PUDPQ08623 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PUDPQ08623 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PUDPQ08623 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PUDPQ08623 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms