Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.99□□□□□ -0.17
H3F3AP84243 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
H3F3AP84243 AC087481.3-201ENST00000602886 1894 ntBASIC13.99□□□□□ -0.17
H3F3AP84243 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
H3F3AP84243 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.99□□□□□ -0.17
H3F3AP84243 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.99□□□□□ -0.17
H3F3AP84243 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.99□□□□□ -0.17
H3F3AP84243 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
H3F3AP84243 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.98□□□□□ -0.17
H3F3AP84243 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.98□□□□□ -0.17
H3F3AP84243 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.98□□□□□ -0.17
H3F3AP84243 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.98□□□□□ -0.17
H3F3AP84243 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
H3F3AP84243 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.98□□□□□ -0.17
H3F3AP84243 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
H3F3AP84243 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.98□□□□□ -0.17
H3F3AP84243 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.98□□□□□ -0.17
H3F3AP84243 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.98□□□□□ -0.17
H3F3AP84243 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
H3F3AP84243 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.98□□□□□ -0.17
H3F3AP84243 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.98□□□□□ -0.17
H3F3AP84243 AC023310.3-201ENST00000557027 670 ntBASIC13.98□□□□□ -0.17
H3F3AP84243 AC100756.1-201ENST00000562736 682 ntBASIC13.98□□□□□ -0.17
H3F3AP84243 AC138749.3-201ENST00000567691 622 ntBASIC13.98□□□□□ -0.17
H3F3AP84243 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
H3F3AP84243 LINC02560-201ENST00000596379 459 ntBASIC13.98□□□□□ -0.17
H3F3AP84243 AC116165.1-201ENST00000611806 668 ntBASIC13.98□□□□□ -0.17
H3F3AP84243 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 AC008761.3-201ENST00000624803 892 ntBASIC13.98□□□□□ -0.17
H3F3AP84243 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.98□□□□□ -0.17
H3F3AP84243 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 AL365209.1-201ENST00000624418 6473 ntBASIC13.98□□□□□ -0.17
H3F3AP84243 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.98□□□□□ -0.17
H3F3AP84243 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.98□□□□□ -0.17
H3F3AP84243 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
H3F3AP84243 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H3F3AP84243 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3AP84243 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3AP84243 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
H3F3AP84243 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.97□□□□□ -0.17
H3F3AP84243 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3AP84243 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3AP84243 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.97□□□□□ -0.17
H3F3AP84243 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3AP84243 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3AP84243 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.97□□□□□ -0.17
H3F3AP84243 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.97□□□□□ -0.17
H3F3AP84243 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.97□□□□□ -0.17
H3F3AP84243 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.97□□□□□ -0.17
H3F3AP84243 AC084364.1-201ENST00000551967 1556 ntBASIC13.97□□□□□ -0.17
H3F3AP84243 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3AP84243 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3AP84243 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3AP84243 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3AP84243 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3AP84243 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3AP84243 SPDYE19P-201ENST00000338590 713 ntBASIC13.97□□□□□ -0.17
H3F3AP84243 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.97□□□□□ -0.17
H3F3AP84243 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3AP84243 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.97□□□□□ -0.17
H3F3AP84243 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.97□□□□□ -0.17
H3F3AP84243 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.97□□□□□ -0.17
H3F3AP84243 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.97□□□□□ -0.17
H3F3AP84243 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.97□□□□□ -0.17
H3F3AP84243 AC093004.1-201ENST00000508850 424 ntBASIC13.97□□□□□ -0.17
H3F3AP84243 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3AP84243 RRP7BP-205ENST00000566851 833 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms