Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.81□□□□□ -0.04
RAE1P78406 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
RAE1P78406 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.81□□□□□ -0.04
RAE1P78406 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.81□□□□□ -0.04
RAE1P78406 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAE1P78406 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAE1P78406 CICP23-201ENST00000605013 2741 ntBASIC14.8□□□□□ -0.04
RAE1P78406 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RAE1P78406 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAE1P78406 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAE1P78406 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.8□□□□□ -0.04
RAE1P78406 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
RAE1P78406 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAE1P78406 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.8□□□□□ -0.04
RAE1P78406 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAE1P78406 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAE1P78406 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RAE1P78406 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAE1P78406 AJ011931.1-201ENST00000618749 2492 ntBASIC14.8□□□□□ -0.04
RAE1P78406 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RAE1P78406 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.8□□□□□ -0.04
RAE1P78406 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAE1P78406 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAE1P78406 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.8□□□□□ -0.04
RAE1P78406 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.8□□□□□ -0.04
RAE1P78406 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.8□□□□□ -0.04
RAE1P78406 FAM86GP-201ENST00000448322 971 ntBASIC14.8□□□□□ -0.04
RAE1P78406 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.8□□□□□ -0.04
RAE1P78406 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.8□□□□□ -0.04
RAE1P78406 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RAE1P78406 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAE1P78406 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.8□□□□□ -0.04
RAE1P78406 AC025181.2-201ENST00000606994 802 ntBASIC14.8□□□□□ -0.04
RAE1P78406 KRT18P28-201ENST00000453838 1332 ntBASIC14.8□□□□□ -0.04
RAE1P78406 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.8□□□□□ -0.04
RAE1P78406 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.8□□□□□ -0.04
RAE1P78406 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RAE1P78406 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAE1P78406 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.8□□□□□ -0.04
RAE1P78406 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAE1P78406 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAE1P78406 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.8□□□□□ -0.04
RAE1P78406 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAE1P78406 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAE1P78406 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.8□□□□□ -0.04
RAE1P78406 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAE1P78406 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAE1P78406 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RAE1P78406 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RAE1P78406 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.79□□□□□ -0.04
RAE1P78406 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 MIR943-201ENST00000401286 94 ntBASIC14.79□□□□□ -0.04
RAE1P78406 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.79□□□□□ -0.04
RAE1P78406 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.79□□□□□ -0.04
RAE1P78406 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.79□□□□□ -0.04
RAE1P78406 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.79□□□□□ -0.04
RAE1P78406 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.79□□□□□ -0.04
RAE1P78406 METTL21AP1-201ENST00000438852 635 ntBASIC14.79□□□□□ -0.04
RAE1P78406 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.79□□□□□ -0.04
RAE1P78406 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.79□□□□□ -0.04
RAE1P78406 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 AC009477.1-201ENST00000452936 217 ntBASIC14.79□□□□□ -0.04
RAE1P78406 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.79□□□□□ -0.04
RAE1P78406 KRT18P43-201ENST00000469825 1281 ntBASIC14.79□□□□□ -0.04
RAE1P78406 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.79□□□□□ -0.04
RAE1P78406 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RAE1P78406 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.79□□□□□ -0.04
RAE1P78406 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.79□□□□□ -0.04
RAE1P78406 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RAE1P78406 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RAE1P78406 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.79□□□□□ -0.04
RAE1P78406 WASH3P-207ENST00000560956 1394 ntBASIC14.79□□□□□ -0.04
RAE1P78406 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RAE1P78406 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RAE1P78406 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RAE1P78406 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 AP000845.1-201ENST00000581677 2131 ntBASIC14.79□□□□□ -0.04
RAE1P78406 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RAE1P78406 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms