Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.43□□□□□ -0.26
ABCA4P78363 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
ABCA4P78363 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
ABCA4P78363 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCA4P78363 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ABCA4P78363 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ABCA4P78363 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCA4P78363 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCA4P78363 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCA4P78363 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ABCA4P78363 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.43□□□□□ -0.26
ABCA4P78363 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.43□□□□□ -0.26
ABCA4P78363 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.43□□□□□ -0.26
ABCA4P78363 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.43□□□□□ -0.26
ABCA4P78363 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.43□□□□□ -0.26
ABCA4P78363 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCA4P78363 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCA4P78363 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCA4P78363 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ABCA4P78363 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCA4P78363 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCA4P78363 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.43□□□□□ -0.26
ABCA4P78363 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.43□□□□□ -0.26
ABCA4P78363 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.43□□□□□ -0.26
ABCA4P78363 BTBD6P1-201ENST00000412176 1267 ntBASIC13.43□□□□□ -0.26
ABCA4P78363 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.43□□□□□ -0.26
ABCA4P78363 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.43□□□□□ -0.26
ABCA4P78363 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
ABCA4P78363 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.43□□□□□ -0.26
ABCA4P78363 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.43□□□□□ -0.26
ABCA4P78363 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.43□□□□□ -0.26
ABCA4P78363 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
ABCA4P78363 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCA4P78363 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ABCA4P78363 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ABCA4P78363 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ABCA4P78363 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
ABCA4P78363 AC006001.1-201ENST00000325130 474 ntBASIC13.42□□□□□ -0.26
ABCA4P78363 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
ABCA4P78363 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.42□□□□□ -0.26
ABCA4P78363 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.42□□□□□ -0.26
ABCA4P78363 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ABCA4P78363 AC138969.2-201ENST00000532739 9932 ntBASIC13.42□□□□□ -0.26
ABCA4P78363 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
ABCA4P78363 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
ABCA4P78363 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.42□□□□□ -0.26
ABCA4P78363 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.42□□□□□ -0.26
ABCA4P78363 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ABCA4P78363 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.42□□□□□ -0.26
ABCA4P78363 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.42□□□□□ -0.26
ABCA4P78363 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
ABCA4P78363 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ABCA4P78363 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
ABCA4P78363 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ABCA4P78363 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.42□□□□□ -0.26
ABCA4P78363 AC104457.1-201ENST00000401024 814 ntBASIC13.42□□□□□ -0.26
ABCA4P78363 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ABCA4P78363 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.42□□□□□ -0.26
ABCA4P78363 SCARNA20.5-201ENST00000516991 142 ntBASIC13.42□□□□□ -0.26
ABCA4P78363 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.42□□□□□ -0.26
ABCA4P78363 MIR3619-201ENST00000579667 83 ntBASIC13.42□□□□□ -0.26
ABCA4P78363 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.42□□□□□ -0.26
ABCA4P78363 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.42□□□□□ -0.26
ABCA4P78363 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCA4P78363 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ABCA4P78363 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.42□□□□□ -0.26
ABCA4P78363 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms