Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.95□□□□□ -0.18
GFRA1P56159 AC092850.2-201ENST00000623821 2697 ntBASIC13.95□□□□□ -0.18
GFRA1P56159 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.95□□□□□ -0.18
GFRA1P56159 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GFRA1P56159 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.94□□□□□ -0.18
GFRA1P56159 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
GFRA1P56159 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.94□□□□□ -0.18
GFRA1P56159 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GFRA1P56159 AC090616.6-203ENST00000579186 1945 ntBASIC13.94□□□□□ -0.18
GFRA1P56159 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
GFRA1P56159 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.94□□□□□ -0.18
GFRA1P56159 AC068418.2-201ENST00000577309 3703 ntBASIC13.94□□□□□ -0.18
GFRA1P56159 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GFRA1P56159 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GFRA1P56159 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GFRA1P56159 OR8S1-201ENST00000310194 1080 ntBASIC13.94□□□□□ -0.18
GFRA1P56159 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GFRA1P56159 ACKR1-201ENST00000368121 1240 ntBASIC13.94□□□□□ -0.18
GFRA1P56159 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
GFRA1P56159 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
GFRA1P56159 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.94□□□□□ -0.18
GFRA1P56159 AC079776.1-201ENST00000401540 1152 ntBASIC13.94□□□□□ -0.18
GFRA1P56159 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
GFRA1P56159 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.94□□□□□ -0.18
GFRA1P56159 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.94□□□□□ -0.18
GFRA1P56159 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.94□□□□□ -0.18
GFRA1P56159 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.94□□□□□ -0.18
GFRA1P56159 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
GFRA1P56159 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.94□□□□□ -0.18
GFRA1P56159 TDH-203ENST00000531764 1110 ntBASIC13.94□□□□□ -0.18
GFRA1P56159 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.94□□□□□ -0.18
GFRA1P56159 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.94□□□□□ -0.18
GFRA1P56159 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.94□□□□□ -0.18
GFRA1P56159 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.94□□□□□ -0.18
GFRA1P56159 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.94□□□□□ -0.18
GFRA1P56159 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.94□□□□□ -0.18
GFRA1P56159 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.94□□□□□ -0.18
GFRA1P56159 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GFRA1P56159 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.94□□□□□ -0.18
GFRA1P56159 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.94□□□□□ -0.18
GFRA1P56159 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GFRA1P56159 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.94□□□□□ -0.18
GFRA1P56159 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GFRA1P56159 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.94□□□□□ -0.18
GFRA1P56159 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
GFRA1P56159 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
GFRA1P56159 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GFRA1P56159 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
GFRA1P56159 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.94□□□□□ -0.18
GFRA1P56159 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GFRA1P56159 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.94□□□□□ -0.18
GFRA1P56159 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GFRA1P56159 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
GFRA1P56159 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
GFRA1P56159 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GFRA1P56159 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.93□□□□□ -0.18
GFRA1P56159 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
GFRA1P56159 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
GFRA1P56159 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
GFRA1P56159 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.93□□□□□ -0.18
GFRA1P56159 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.93□□□□□ -0.18
GFRA1P56159 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.93□□□□□ -0.18
GFRA1P56159 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 GPR53P-205ENST00000457298 1084 ntBASIC13.93□□□□□ -0.18
GFRA1P56159 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.93□□□□□ -0.18
GFRA1P56159 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.93□□□□□ -0.18
GFRA1P56159 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
GFRA1P56159 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.93□□□□□ -0.18
GFRA1P56159 PTP4A1P2-201ENST00000546033 454 ntBASIC13.93□□□□□ -0.18
GFRA1P56159 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.93□□□□□ -0.18
GFRA1P56159 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.93□□□□□ -0.18
GFRA1P56159 BTNL10-201ENST00000595971 695 ntBASIC13.93□□□□□ -0.18
GFRA1P56159 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.93□□□□□ -0.18
GFRA1P56159 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
GFRA1P56159 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
GFRA1P56159 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.93□□□□□ -0.18
GFRA1P56159 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
GFRA1P56159 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.93□□□□□ -0.18
GFRA1P56159 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms