Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.41□□□□□ -0.1
CDH11P55287 SPCS2P4-201ENST00000436160 681 ntBASIC14.41□□□□□ -0.1
CDH11P55287 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH11P55287 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.41□□□□□ -0.1
CDH11P55287 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH11P55287 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.41□□□□□ -0.1
CDH11P55287 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH11P55287 AC093512.1-201ENST00000617969 520 ntBASIC14.41□□□□□ -0.1
CDH11P55287 AC073439.1-201ENST00000624121 1774 ntBASIC14.41□□□□□ -0.1
CDH11P55287 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH11P55287 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH11P55287 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CDH11P55287 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH11P55287 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDH11P55287 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH11P55287 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDH11P55287 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH11P55287 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CDH11P55287 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH11P55287 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH11P55287 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CDH11P55287 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH11P55287 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH11P55287 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH11P55287 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH11P55287 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH11P55287 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH11P55287 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH11P55287 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH11P55287 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH11P55287 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH11P55287 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH11P55287 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CDH11P55287 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH11P55287 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CDH11P55287 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CDH11P55287 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.4□□□□□ -0.1
CDH11P55287 CNN2P2-201ENST00000443536 909 ntBASIC14.4□□□□□ -0.1
CDH11P55287 CNN2P3-201ENST00000450201 906 ntBASIC14.4□□□□□ -0.1
CDH11P55287 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH11P55287 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 AC069335.1-201ENST00000489972 472 ntBASIC14.4□□□□□ -0.1
CDH11P55287 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH11P55287 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH11P55287 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.4□□□□□ -0.1
CDH11P55287 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.4□□□□□ -0.1
CDH11P55287 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CDH11P55287 AC011467.4-201ENST00000594891 528 ntBASIC14.4□□□□□ -0.1
CDH11P55287 AL136317.3-201ENST00000618497 906 ntBASIC14.4□□□□□ -0.1
CDH11P55287 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CDH11P55287 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CDH11P55287 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CDH11P55287 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CDH11P55287 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH11P55287 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH11P55287 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CDH11P55287 AC009090.5-201ENST00000624886 2285 ntBASIC14.4□□□□□ -0.1
CDH11P55287 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH11P55287 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.4□□□□□ -0.1
CDH11P55287 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CDH11P55287 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CDH11P55287 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH11P55287 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CDH11P55287 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.11
CDH11P55287 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.39□□□□□ -0.11
CDH11P55287 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CDH11P55287 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDH11P55287 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH11P55287 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH11P55287 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH11P55287 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH11P55287 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH11P55287 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.39□□□□□ -0.11
CDH11P55287 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH11P55287 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH11P55287 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.39□□□□□ -0.11
CDH11P55287 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH11P55287 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDH11P55287 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH11P55287 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDH11P55287 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms