Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.6■□□□□ 0.41
EPHB4P54760 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.6■□□□□ 0.41
EPHB4P54760 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.6■□□□□ 0.41
EPHB4P54760 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.6■□□□□ 0.41
EPHB4P54760 LINC01115-203ENST00000606068 577 ntBASIC17.6■□□□□ 0.41
EPHB4P54760 AC009542.2-202ENST00000619004 1067 ntBASIC17.6■□□□□ 0.41
EPHB4P54760 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.6■□□□□ 0.41
EPHB4P54760 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHB4P54760 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHB4P54760 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.6■□□□□ 0.41
EPHB4P54760 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHB4P54760 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.6■□□□□ 0.41
EPHB4P54760 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.6■□□□□ 0.41
EPHB4P54760 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EPHB4P54760 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EPHB4P54760 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHB4P54760 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHB4P54760 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHB4P54760 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EPHB4P54760 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHB4P54760 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
EPHB4P54760 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
EPHB4P54760 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.59■□□□□ 0.41
EPHB4P54760 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.59■□□□□ 0.41
EPHB4P54760 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHB4P54760 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
EPHB4P54760 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.59■□□□□ 0.41
EPHB4P54760 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 RPL13AP20-201ENST00000459725 609 ntBASIC17.59■□□□□ 0.41
EPHB4P54760 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHB4P54760 AP001889.1-201ENST00000525414 633 ntBASIC17.59■□□□□ 0.41
EPHB4P54760 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.59■□□□□ 0.41
EPHB4P54760 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
EPHB4P54760 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHB4P54760 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.59■□□□□ 0.41
EPHB4P54760 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.59■□□□□ 0.41
EPHB4P54760 AC133539.2-201ENST00000604757 467 ntBASIC17.59■□□□□ 0.41
EPHB4P54760 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
EPHB4P54760 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB4P54760 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.58■□□□□ 0.41
EPHB4P54760 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB4P54760 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB4P54760 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB4P54760 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB4P54760 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB4P54760 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB4P54760 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB4P54760 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.58■□□□□ 0.41
EPHB4P54760 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.58■□□□□ 0.41
EPHB4P54760 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.58■□□□□ 0.41
EPHB4P54760 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB4P54760 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB4P54760 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHB4P54760 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHB4P54760 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB4P54760 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.58■□□□□ 0.4
EPHB4P54760 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.58■□□□□ 0.4
EPHB4P54760 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.58■□□□□ 0.4
EPHB4P54760 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.58■□□□□ 0.4
EPHB4P54760 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.58■□□□□ 0.4
EPHB4P54760 AL359711.2-201ENST00000563105 872 ntBASIC17.58■□□□□ 0.4
EPHB4P54760 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.58■□□□□ 0.4
EPHB4P54760 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHB4P54760 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHB4P54760 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
EPHB4P54760 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHB4P54760 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB4P54760 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHB4P54760 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.58■□□□□ 0.4
EPHB4P54760 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.4
EPHB4P54760 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB4P54760 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB4P54760 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHB4P54760 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
EPHB4P54760 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHB4P54760 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
EPHB4P54760 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB4P54760 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms