Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.19■□□□□ 0.02
PDX1P52945 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.19■□□□□ 0.02
PDX1P52945 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.19■□□□□ 0.02
PDX1P52945 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
PDX1P52945 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.19■□□□□ 0.02
PDX1P52945 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PDX1P52945 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PDX1P52945 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.19■□□□□ 0.02
PDX1P52945 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 INTS4P2-202ENST00000614726 2019 ntBASIC15.19■□□□□ 0.02
PDX1P52945 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.19■□□□□ 0.02
PDX1P52945 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PDX1P52945 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.18■□□□□ 0.02
PDX1P52945 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.18■□□□□ 0.02
PDX1P52945 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
PDX1P52945 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.18■□□□□ 0.02
PDX1P52945 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.18■□□□□ 0.02
PDX1P52945 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.18■□□□□ 0.02
PDX1P52945 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PDX1P52945 TOMM22P5-201ENST00000416399 439 ntBASIC15.18■□□□□ 0.02
PDX1P52945 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.18■□□□□ 0.02
PDX1P52945 ACTBP11-201ENST00000436287 1126 ntBASIC15.18■□□□□ 0.02
PDX1P52945 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.18■□□□□ 0.02
PDX1P52945 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.18■□□□□ 0.02
PDX1P52945 KLF2P4-201ENST00000451959 1225 ntBASIC15.18■□□□□ 0.02
PDX1P52945 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
PDX1P52945 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.18■□□□□ 0.02
PDX1P52945 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PDX1P52945 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.18■□□□□ 0.02
PDX1P52945 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.18■□□□□ 0.02
PDX1P52945 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.18■□□□□ 0.02
PDX1P52945 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.18■□□□□ 0.02
PDX1P52945 AL022328.1-201ENST00000610050 478 ntBASIC15.18■□□□□ 0.02
PDX1P52945 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.18■□□□□ 0.02
PDX1P52945 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.18■□□□□ 0.02
PDX1P52945 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.18■□□□□ 0.02
PDX1P52945 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.18■□□□□ 0.02
PDX1P52945 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDX1P52945 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.18■□□□□ 0.02
PDX1P52945 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.17■□□□□ 0.02
PDX1P52945 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
PDX1P52945 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PDX1P52945 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PDX1P52945 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.17■□□□□ 0.02
PDX1P52945 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.17■□□□□ 0.02
PDX1P52945 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.17■□□□□ 0.02
PDX1P52945 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
PDX1P52945 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
PDX1P52945 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.17■□□□□ 0.02
PDX1P52945 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.17■□□□□ 0.02
PDX1P52945 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.17■□□□□ 0.02
PDX1P52945 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.17■□□□□ 0.02
PDX1P52945 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.17■□□□□ 0.02
PDX1P52945 BCRP2-202ENST00000447763 634 ntBASIC15.17■□□□□ 0.02
PDX1P52945 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.17■□□□□ 0.02
PDX1P52945 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 BCRP6-201ENST00000510112 632 ntBASIC15.17■□□□□ 0.02
PDX1P52945 BCRP7-201ENST00000511549 544 ntBASIC15.17■□□□□ 0.02
PDX1P52945 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDX1P52945 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.17■□□□□ 0.02
PDX1P52945 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms