Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 MBLAC2-202ENST00000514906 1936 ntBASIC17.06■□□□□ 0.32
BRCA2P51587 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BRCA2P51587 EIF3FP3-201ENST00000434851 1086 ntBASIC17.06■□□□□ 0.32
BRCA2P51587 BRI3P1-201ENST00000440440 378 ntBASIC17.06■□□□□ 0.32
BRCA2P51587 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.06■□□□□ 0.32
BRCA2P51587 RPL18AP3-201ENST00000462885 528 ntBASIC17.06■□□□□ 0.32
BRCA2P51587 AL132994.2-201ENST00000603120 687 ntBASIC17.06■□□□□ 0.32
BRCA2P51587 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.06■□□□□ 0.32
BRCA2P51587 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.06■□□□□ 0.32
BRCA2P51587 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRCA2P51587 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.05■□□□□ 0.32
BRCA2P51587 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
BRCA2P51587 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.05■□□□□ 0.32
BRCA2P51587 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCA2P51587 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.05■□□□□ 0.32
BRCA2P51587 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.05■□□□□ 0.32
BRCA2P51587 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCA2P51587 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
BRCA2P51587 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCA2P51587 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
BRCA2P51587 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCA2P51587 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.05■□□□□ 0.32
BRCA2P51587 AL358472.3-201ENST00000608147 415 ntBASIC17.05■□□□□ 0.32
BRCA2P51587 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCA2P51587 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCA2P51587 AC006449.5-201ENST00000610658 2098 ntBASIC17.05■□□□□ 0.32
BRCA2P51587 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRCA2P51587 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.05■□□□□ 0.32
BRCA2P51587 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
BRCA2P51587 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.05■□□□□ 0.32
BRCA2P51587 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRCA2P51587 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCA2P51587 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.05■□□□□ 0.32
BRCA2P51587 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCA2P51587 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRCA2P51587 ACTBP7-201ENST00000418351 1124 ntBASIC17.05■□□□□ 0.32
BRCA2P51587 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.05■□□□□ 0.32
BRCA2P51587 RPL7P35-201ENST00000446943 740 ntBASIC17.05■□□□□ 0.32
BRCA2P51587 RN7SL258P-201ENST00000478664 300 ntBASIC17.05■□□□□ 0.32
BRCA2P51587 C2orf69P1-201ENST00000563532 1093 ntBASIC17.05■□□□□ 0.32
BRCA2P51587 AL031713.1-201ENST00000564813 661 ntBASIC17.05■□□□□ 0.32
BRCA2P51587 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRCA2P51587 AC006449.6-201ENST00000612330 2296 ntBASIC17.05■□□□□ 0.32
BRCA2P51587 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
BRCA2P51587 PCDHA12-202ENST00000613593 2588 ntBASIC17.05■□□□□ 0.32
BRCA2P51587 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCA2P51587 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.05■□□□□ 0.32
BRCA2P51587 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCA2P51587 IL9RP3-201ENST00000442856 1674 ntBASIC17.05■□□□□ 0.32
BRCA2P51587 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCA2P51587 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
BRCA2P51587 AC020916.1-201ENST00000587762 1774 ntBASIC17.05■□□□□ 0.32
BRCA2P51587 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.05■□□□□ 0.32
BRCA2P51587 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.05■□□□□ 0.32
BRCA2P51587 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.05■□□□□ 0.32
BRCA2P51587 RN7SL67P-201ENST00000492147 296 ntBASIC17.05■□□□□ 0.32
BRCA2P51587 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.05■□□□□ 0.32
BRCA2P51587 AC027237.1-201ENST00000560942 655 ntBASIC17.05■□□□□ 0.32
BRCA2P51587 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.05■□□□□ 0.32
BRCA2P51587 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.05■□□□□ 0.32
BRCA2P51587 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCA2P51587 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCA2P51587 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRCA2P51587 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
BRCA2P51587 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRCA2P51587 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCA2P51587 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCA2P51587 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.04■□□□□ 0.32
BRCA2P51587 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
BRCA2P51587 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.04■□□□□ 0.32
BRCA2P51587 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRCA2P51587 AC073911.3-201ENST00000624401 631 ntBASIC17.04■□□□□ 0.32
BRCA2P51587 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.04■□□□□ 0.32
BRCA2P51587 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRCA2P51587 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
BRCA2P51587 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCA2P51587 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.04■□□□□ 0.32
BRCA2P51587 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRCA2P51587 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCA2P51587 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC17.04■□□□□ 0.32
BRCA2P51587 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.04■□□□□ 0.32
BRCA2P51587 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
BRCA2P51587 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
BRCA2P51587 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCA2P51587 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRCA2P51587 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.04■□□□□ 0.32
BRCA2P51587 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRCA2P51587 AC005632.3-201ENST00000605544 308 ntBASIC17.04■□□□□ 0.32
BRCA2P51587 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.04■□□□□ 0.32
BRCA2P51587 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCA2P51587 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
BRCA2P51587 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
BRCA2P51587 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRCA2P51587 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.03■□□□□ 0.32
BRCA2P51587 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.03■□□□□ 0.32
BRCA2P51587 HKR1-225ENST00000592168 566 ntTSL 4 BASIC17.03■□□□□ 0.32
BRCA2P51587 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.03■□□□□ 0.32
BRCA2P51587 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCA2P51587 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.03■□□□□ 0.32
BRCA2P51587 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms