Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN1P35523 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.86■□□□□ 0.45
CLCN1P35523 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.86■□□□□ 0.45
CLCN1P35523 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN1P35523 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.86■□□□□ 0.45
CLCN1P35523 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN1P35523 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.86■□□□□ 0.45
CLCN1P35523 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN1P35523 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC17.86■□□□□ 0.45
CLCN1P35523 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN1P35523 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.86■□□□□ 0.45
CLCN1P35523 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CLCN1P35523 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CLCN1P35523 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CLCN1P35523 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN1P35523 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN1P35523 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN1P35523 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN1P35523 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN1P35523 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC17.85■□□□□ 0.45
CLCN1P35523 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN1P35523 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN1P35523 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN1P35523 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CLCN1P35523 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN1P35523 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CLCN1P35523 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CLCN1P35523 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN1P35523 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN1P35523 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN1P35523 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CLCN1P35523 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CLCN1P35523 VN2R19P-201ENST00000442399 1052 ntBASIC17.85■□□□□ 0.45
CLCN1P35523 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.85■□□□□ 0.45
CLCN1P35523 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.85■□□□□ 0.45
CLCN1P35523 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CLCN1P35523 CXCL1P1-201ENST00000502804 216 ntBASIC17.85■□□□□ 0.45
CLCN1P35523 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CLCN1P35523 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.85■□□□□ 0.45
CLCN1P35523 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.85■□□□□ 0.45
CLCN1P35523 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.85■□□□□ 0.45
CLCN1P35523 MIR4751-201ENST00000578027 74 ntBASIC17.85■□□□□ 0.45
CLCN1P35523 AL121894.2-201ENST00000602977 491 ntBASIC17.85■□□□□ 0.45
CLCN1P35523 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.85■□□□□ 0.45
CLCN1P35523 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CLCN1P35523 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CLCN1P35523 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CLCN1P35523 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN1P35523 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CLCN1P35523 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN1P35523 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN1P35523 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CLCN1P35523 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCN1P35523 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 ZBED1P1-201ENST00000502364 1930 ntBASIC17.84■□□□□ 0.45
CLCN1P35523 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCN1P35523 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CLCN1P35523 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.84■□□□□ 0.45
CLCN1P35523 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 AC012569.1-201ENST00000591191 1524 ntBASIC17.84■□□□□ 0.45
CLCN1P35523 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLCN1P35523 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.84■□□□□ 0.45
CLCN1P35523 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCN1P35523 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CLCN1P35523 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCN1P35523 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.84■□□□□ 0.45
CLCN1P35523 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.84■□□□□ 0.45
CLCN1P35523 MIR4515-201ENST00000584082 81 ntBASIC17.84■□□□□ 0.45
CLCN1P35523 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.84■□□□□ 0.45
CLCN1P35523 AP001350.2-201ENST00000625104 1094 ntBASIC17.84■□□□□ 0.45
CLCN1P35523 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCN1P35523 AC083964.2-201ENST00000623988 2396 ntBASIC17.84■□□□□ 0.45
CLCN1P35523 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CLCN1P35523 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CLCN1P35523 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.84■□□□□ 0.45
CLCN1P35523 GPAA1P2-202ENST00000606848 1787 ntBASIC17.84■□□□□ 0.45
CLCN1P35523 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN1P35523 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLCN1P35523 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.83■□□□□ 0.45
CLCN1P35523 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms