Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC009084.3-201ENST00000623356 437 ntBASIC17.26■□□□□ 0.35
CTGFP29279 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTGFP29279 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTGFP29279 TBC1D3J-201ENST00000620719 1426 ntBASIC17.26■□□□□ 0.35
CTGFP29279 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CTGFP29279 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTGFP29279 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTGFP29279 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTGFP29279 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.26■□□□□ 0.35
CTGFP29279 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTGFP29279 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTGFP29279 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTGFP29279 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTGFP29279 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.26■□□□□ 0.35
CTGFP29279 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTGFP29279 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTGFP29279 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTGFP29279 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.26■□□□□ 0.35
CTGFP29279 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTGFP29279 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CTGFP29279 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.25■□□□□ 0.35
CTGFP29279 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.25■□□□□ 0.35
CTGFP29279 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.25■□□□□ 0.35
CTGFP29279 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 RN7SKP175-201ENST00000408472 289 ntBASIC17.25■□□□□ 0.35
CTGFP29279 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.25■□□□□ 0.35
CTGFP29279 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.25■□□□□ 0.35
CTGFP29279 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.25■□□□□ 0.35
CTGFP29279 CTBP2P4-201ENST00000513884 920 ntBASIC17.25■□□□□ 0.35
CTGFP29279 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.25■□□□□ 0.35
CTGFP29279 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.25■□□□□ 0.35
CTGFP29279 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CTGFP29279 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.25■□□□□ 0.35
CTGFP29279 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.25■□□□□ 0.35
CTGFP29279 REXO1L5P-201ENST00000622260 2098 ntBASIC17.25■□□□□ 0.35
CTGFP29279 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CTGFP29279 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTGFP29279 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CTGFP29279 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CTGFP29279 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTGFP29279 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTGFP29279 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CTGFP29279 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTGFP29279 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTGFP29279 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTGFP29279 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.24■□□□□ 0.35
CTGFP29279 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.24■□□□□ 0.35
CTGFP29279 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTGFP29279 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.24■□□□□ 0.35
CTGFP29279 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTGFP29279 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.24■□□□□ 0.35
CTGFP29279 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTGFP29279 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CTGFP29279 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.24■□□□□ 0.35
CTGFP29279 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC17.24■□□□□ 0.35
CTGFP29279 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CTGFP29279 AL603764.1-201ENST00000636452 321 ntBASIC17.24■□□□□ 0.35
CTGFP29279 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.24■□□□□ 0.35
CTGFP29279 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTGFP29279 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTGFP29279 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTGFP29279 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTGFP29279 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
CTGFP29279 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTGFP29279 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CTGFP29279 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTGFP29279 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CTGFP29279 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTGFP29279 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.23■□□□□ 0.35
CTGFP29279 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CTGFP29279 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTGFP29279 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
CTGFP29279 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.23■□□□□ 0.35
CTGFP29279 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTGFP29279 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTGFP29279 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTGFP29279 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTGFP29279 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CTGFP29279 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTGFP29279 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTGFP29279 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTGFP29279 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTGFP29279 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CTGFP29279 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTGFP29279 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms