Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC098859.1-201ENST00000502915 1238 ntBASIC14.84□□□□□ -0.03
NCK1P16333 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.84□□□□□ -0.03
NCK1P16333 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NCK1P16333 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.84□□□□□ -0.03
NCK1P16333 SPTSSB-204ENST00000617024 1292 ntBASIC14.84□□□□□ -0.03
NCK1P16333 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.84□□□□□ -0.03
NCK1P16333 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
NCK1P16333 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NCK1P16333 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.84□□□□□ -0.03
NCK1P16333 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCK1P16333 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
NCK1P16333 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCK1P16333 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCK1P16333 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCK1P16333 BCAR1-209ENST00000546196 1340 ntBASIC14.84□□□□□ -0.03
NCK1P16333 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NCK1P16333 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCK1P16333 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
NCK1P16333 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.84□□□□□ -0.03
NCK1P16333 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCK1P16333 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NCK1P16333 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
NCK1P16333 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
NCK1P16333 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
NCK1P16333 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
NCK1P16333 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
NCK1P16333 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.83□□□□□ -0.03
NCK1P16333 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
NCK1P16333 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NCK1P16333 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCK1P16333 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCK1P16333 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCK1P16333 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.83□□□□□ -0.04
NCK1P16333 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.83□□□□□ -0.04
NCK1P16333 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
NCK1P16333 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCK1P16333 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
NCK1P16333 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCK1P16333 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
NCK1P16333 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCK1P16333 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCK1P16333 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NCK1P16333 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.83□□□□□ -0.04
NCK1P16333 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NCK1P16333 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.83□□□□□ -0.04
NCK1P16333 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.83□□□□□ -0.04
NCK1P16333 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.83□□□□□ -0.04
NCK1P16333 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.83□□□□□ -0.04
NCK1P16333 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.83□□□□□ -0.04
NCK1P16333 AC018845.2-201ENST00000568326 409 ntBASIC14.83□□□□□ -0.04
NCK1P16333 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.83□□□□□ -0.04
NCK1P16333 AC024267.1-201ENST00000582320 895 ntBASIC14.83□□□□□ -0.04
NCK1P16333 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
NCK1P16333 AC004877.2-201ENST00000623941 599 ntBASIC14.83□□□□□ -0.04
NCK1P16333 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCK1P16333 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCK1P16333 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCK1P16333 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCK1P16333 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NCK1P16333 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCK1P16333 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.83□□□□□ -0.04
NCK1P16333 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.83□□□□□ -0.04
NCK1P16333 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.83□□□□□ -0.04
NCK1P16333 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.83□□□□□ -0.04
NCK1P16333 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NCK1P16333 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCK1P16333 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.82□□□□□ -0.04
NCK1P16333 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
NCK1P16333 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 ST20-AS1-201ENST00000560255 4223 ntBASIC14.82□□□□□ -0.04
NCK1P16333 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NCK1P16333 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.82□□□□□ -0.04
NCK1P16333 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.82□□□□□ -0.04
NCK1P16333 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.82□□□□□ -0.04
NCK1P16333 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.82□□□□□ -0.04
NCK1P16333 RPS8P6-201ENST00000426177 609 ntBASIC14.82□□□□□ -0.04
NCK1P16333 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.82□□□□□ -0.04
NCK1P16333 AC079781.3-201ENST00000449110 356 ntBASIC14.82□□□□□ -0.04
NCK1P16333 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.82□□□□□ -0.04
NCK1P16333 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.82□□□□□ -0.04
NCK1P16333 RNA5SP415-201ENST00000517246 115 ntBASIC14.82□□□□□ -0.04
NCK1P16333 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.82□□□□□ -0.04
NCK1P16333 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.82□□□□□ -0.04
NCK1P16333 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.82□□□□□ -0.04
NCK1P16333 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
NCK1P16333 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
NCK1P16333 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.82□□□□□ -0.04
NCK1P16333 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.82□□□□□ -0.04
NCK1P16333 AC116407.3-201ENST00000623905 1129 ntBASIC14.82□□□□□ -0.04
NCK1P16333 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.82□□□□□ -0.04
NCK1P16333 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NCK1P16333 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NCK1P16333 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms