Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCF4P15884 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.3■□□□□ 0.2
TCF4P15884 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.3■□□□□ 0.2
TCF4P15884 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.3■□□□□ 0.2
TCF4P15884 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TCF4P15884 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TCF4P15884 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TCF4P15884 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 MIR943-201ENST00000401286 94 ntBASIC16.3■□□□□ 0.2
TCF4P15884 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.3■□□□□ 0.2
TCF4P15884 FAM86GP-201ENST00000448322 971 ntBASIC16.3■□□□□ 0.2
TCF4P15884 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.3■□□□□ 0.2
TCF4P15884 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.3■□□□□ 0.2
TCF4P15884 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.3■□□□□ 0.2
TCF4P15884 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.3■□□□□ 0.2
TCF4P15884 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.3■□□□□ 0.2
TCF4P15884 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 AC106881.1-201ENST00000605849 3329 ntBASIC16.3■□□□□ 0.2
TCF4P15884 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.3■□□□□ 0.2
TCF4P15884 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCF4P15884 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.29■□□□□ 0.2
TCF4P15884 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TCF4P15884 AC068418.2-201ENST00000577309 3703 ntBASIC16.29■□□□□ 0.2
TCF4P15884 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.29■□□□□ 0.2
TCF4P15884 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 AC087499.5-201ENST00000452760 1342 ntBASIC16.29■□□□□ 0.2
TCF4P15884 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.29■□□□□ 0.2
TCF4P15884 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.29■□□□□ 0.2
TCF4P15884 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.29■□□□□ 0.2
TCF4P15884 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.29■□□□□ 0.2
TCF4P15884 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.29■□□□□ 0.2
TCF4P15884 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.29■□□□□ 0.2
TCF4P15884 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TCF4P15884 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.29■□□□□ 0.2
TCF4P15884 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.29■□□□□ 0.2
TCF4P15884 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TCF4P15884 AL390955.2-201ENST00000603032 514 ntBASIC16.29■□□□□ 0.2
TCF4P15884 AL158211.3-201ENST00000607385 239 ntBASIC16.29■□□□□ 0.2
TCF4P15884 AC006538.3-201ENST00000612495 578 ntBASIC16.29■□□□□ 0.2
TCF4P15884 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TCF4P15884 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TCF4P15884 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.29■□□□□ 0.2
TCF4P15884 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TCF4P15884 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.29■□□□□ 0.2
TCF4P15884 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.29■□□□□ 0.2
TCF4P15884 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.29■□□□□ 0.2
TCF4P15884 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCF4P15884 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.29■□□□□ 0.2
TCF4P15884 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TCF4P15884 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCF4P15884 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCF4P15884 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCF4P15884 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TCF4P15884 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCF4P15884 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TCF4P15884 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TCF4P15884 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TCF4P15884 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TCF4P15884 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TCF4P15884 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCF4P15884 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCF4P15884 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCF4P15884 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCF4P15884 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCF4P15884 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.28■□□□□ 0.2
TCF4P15884 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.28■□□□□ 0.2
TCF4P15884 AC015922.1-201ENST00000421102 1152 ntBASIC16.28■□□□□ 0.2
TCF4P15884 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms