Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
CFTRP13569 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
CFTRP13569 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC25.99■■□□□ 1.75
CFTRP13569 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CFTRP13569 STX6-204ENST00000542060 4809 ntTSL 2 BASIC25.99■■□□□ 1.75
CFTRP13569 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
CFTRP13569 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC25.98■■□□□ 1.75
CFTRP13569 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CFTRP13569 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CFTRP13569 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC25.98■■□□□ 1.75
CFTRP13569 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC25.98■■□□□ 1.75
CFTRP13569 RBM8B-201ENST00000555532 525 ntBASIC25.98■■□□□ 1.75
CFTRP13569 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC25.98■■□□□ 1.75
CFTRP13569 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC25.98■■□□□ 1.75
CFTRP13569 CMC2-224ENST00000630396 481 ntTSL 5 BASIC25.98■■□□□ 1.75
CFTRP13569 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC25.98■■□□□ 1.75
CFTRP13569 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CFTRP13569 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CFTRP13569 AC011676.5-201ENST00000624864 2660 ntBASIC25.98■■□□□ 1.75
CFTRP13569 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC25.98■■□□□ 1.75
CFTRP13569 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CFTRP13569 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
CFTRP13569 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC25.98■■□□□ 1.75
CFTRP13569 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CFTRP13569 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CFTRP13569 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC25.98■■□□□ 1.75
CFTRP13569 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CFTRP13569 AL512430.1-201ENST00000392575 860 ntBASIC25.98■■□□□ 1.75
CFTRP13569 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CFTRP13569 AC006122.1-201ENST00000493323 440 ntBASIC25.98■■□□□ 1.75
CFTRP13569 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
CFTRP13569 AC020910.5-201ENST00000623668 1865 ntBASIC25.97■■□□□ 1.75
CFTRP13569 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
CFTRP13569 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
CFTRP13569 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CFTRP13569 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC25.97■■□□□ 1.75
CFTRP13569 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CFTRP13569 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CFTRP13569 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
CFTRP13569 AP000356.3-201ENST00000382243 753 ntBASIC25.97■■□□□ 1.75
CFTRP13569 MIR1227-201ENST00000408484 88 ntBASIC25.97■■□□□ 1.75
CFTRP13569 HPGD-203ENST00000422112 805 ntTSL 2 BASIC25.97■■□□□ 1.75
CFTRP13569 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC25.97■■□□□ 1.75
CFTRP13569 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC25.97■■□□□ 1.75
CFTRP13569 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC25.97■■□□□ 1.75
CFTRP13569 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CFTRP13569 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC25.97■■□□□ 1.75
CFTRP13569 MIR6720-201ENST00000611664 98 ntBASIC25.97■■□□□ 1.75
CFTRP13569 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
CFTRP13569 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC25.97■■□□□ 1.75
CFTRP13569 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CFTRP13569 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CFTRP13569 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CFTRP13569 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC25.96■■□□□ 1.75
CFTRP13569 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CFTRP13569 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CFTRP13569 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC25.96■■□□□ 1.75
CFTRP13569 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CFTRP13569 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CFTRP13569 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CFTRP13569 AC136759.1-202ENST00000530858 2194 ntBASIC25.96■■□□□ 1.75
CFTRP13569 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CFTRP13569 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC25.96■■□□□ 1.75
CFTRP13569 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
CFTRP13569 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CFTRP13569 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
CFTRP13569 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CFTRP13569 AL157407.1-201ENST00000435784 904 ntBASIC25.96■■□□□ 1.75
CFTRP13569 AL645933.1-201ENST00000440087 609 ntBASIC25.96■■□□□ 1.75
CFTRP13569 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC25.96■■□□□ 1.75
CFTRP13569 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC25.96■■□□□ 1.75
CFTRP13569 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CFTRP13569 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
CFTRP13569 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC25.96■■□□□ 1.75
CFTRP13569 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC25.96■■□□□ 1.75
CFTRP13569 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CFTRP13569 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
CFTRP13569 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CFTRP13569 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
CFTRP13569 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC25.95■■□□□ 1.75
CFTRP13569 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC25.95■■□□□ 1.75
CFTRP13569 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.75
CFTRP13569 LINC02447-202ENST00000501888 2146 ntBASIC25.95■■□□□ 1.75
CFTRP13569 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CFTRP13569 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
CFTRP13569 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
CFTRP13569 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CFTRP13569 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC25.95■■□□□ 1.74
CFTRP13569 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CFTRP13569 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC25.95■■□□□ 1.74
CFTRP13569 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CFTRP13569 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CFTRP13569 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC25.95■■□□□ 1.74
CFTRP13569 PIN4P1-201ENST00000451079 396 ntBASIC25.95■■□□□ 1.74
CFTRP13569 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CFTRP13569 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC25.95■■□□□ 1.74
CFTRP13569 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CFTRP13569 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC25.95■■□□□ 1.74
CFTRP13569 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC25.95■■□□□ 1.74
CFTRP13569 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms