Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 INTS4P2-202ENST00000614726 2019 ntBASIC12.25□□□□□ -0.45
CD28P10747 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CD28P10747 ANKRD19P-201ENST00000338192 862 ntBASIC12.25□□□□□ -0.45
CD28P10747 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 BOLA2P3-201ENST00000404566 256 ntBASIC12.25□□□□□ -0.45
CD28P10747 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.25□□□□□ -0.45
CD28P10747 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.25□□□□□ -0.45
CD28P10747 SOCS2P1-201ENST00000417727 557 ntBASIC12.25□□□□□ -0.45
CD28P10747 AC136604.1-201ENST00000418535 575 ntBASIC12.25□□□□□ -0.45
CD28P10747 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.25□□□□□ -0.45
CD28P10747 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.25□□□□□ -0.45
CD28P10747 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.25□□□□□ -0.45
CD28P10747 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 VDAC1P7-201ENST00000462417 847 ntBASIC12.25□□□□□ -0.45
CD28P10747 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.25□□□□□ -0.45
CD28P10747 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.25□□□□□ -0.45
CD28P10747 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.25□□□□□ -0.45
CD28P10747 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.25□□□□□ -0.45
CD28P10747 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CD28P10747 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.25□□□□□ -0.45
CD28P10747 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CD28P10747 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.25□□□□□ -0.45
CD28P10747 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 CICP6-201ENST00000457191 2729 ntBASIC12.25□□□□□ -0.45
CD28P10747 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.25□□□□□ -0.45
CD28P10747 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.25□□□□□ -0.45
CD28P10747 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.25□□□□□ -0.45
CD28P10747 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CD28P10747 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.25□□□□□ -0.45
CD28P10747 AC018892.3-201ENST00000623986 2499 ntBASIC12.25□□□□□ -0.45
CD28P10747 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD28P10747 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.24□□□□□ -0.45
CD28P10747 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CD28P10747 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.24□□□□□ -0.45
CD28P10747 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CD28P10747 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CD28P10747 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CD28P10747 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.24□□□□□ -0.45
CD28P10747 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.24□□□□□ -0.45
CD28P10747 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.24□□□□□ -0.45
CD28P10747 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD28P10747 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.24□□□□□ -0.45
CD28P10747 ACTG1P3-201ENST00000431775 1114 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms