Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.12■□□□□ 0.01
SP9P0CG40 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SP9P0CG40 AC012362.1-201ENST00000434906 739 ntBASIC15.12■□□□□ 0.01
SP9P0CG40 RN7SL258P-201ENST00000478664 300 ntBASIC15.12■□□□□ 0.01
SP9P0CG40 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.12■□□□□ 0.01
SP9P0CG40 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.12■□□□□ 0.01
SP9P0CG40 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.12■□□□□ 0.01
SP9P0CG40 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.12■□□□□ 0.01
SP9P0CG40 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.12■□□□□ 0.01
SP9P0CG40 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.12■□□□□ 0.01
SP9P0CG40 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.12■□□□□ 0.01
SP9P0CG40 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.12■□□□□ 0.01
SP9P0CG40 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SP9P0CG40 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.12■□□□□ 0.01
SP9P0CG40 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.12■□□□□ 0.01
SP9P0CG40 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.11■□□□□ 0.01
SP9P0CG40 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SP9P0CG40 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.11■□□□□ 0.01
SP9P0CG40 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.11■□□□□ 0.01
SP9P0CG40 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.11■□□□□ 0.01
SP9P0CG40 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 OR2K2-202ENST00000374428 1038 ntBASIC15.11■□□□□ 0.01
SP9P0CG40 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 RN7SL67P-201ENST00000492147 296 ntBASIC15.11■□□□□ 0.01
SP9P0CG40 HLA-J-204ENST00000495278 958 ntBASIC15.11■□□□□ 0.01
SP9P0CG40 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.11■□□□□ 0.01
SP9P0CG40 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.11■□□□□ 0.01
SP9P0CG40 AC004466.1-201ENST00000599515 1080 ntBASIC15.11■□□□□ 0.01
SP9P0CG40 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.11■□□□□ 0.01
SP9P0CG40 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.11■□□□□ 0.01
SP9P0CG40 AC022188.1-201ENST00000620960 1664 ntBASIC15.11■□□□□ 0.01
SP9P0CG40 NOC2LP2-201ENST00000407594 1944 ntBASIC15.11■□□□□ 0.01
SP9P0CG40 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.11■□□□□ 0.01
SP9P0CG40 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.11■□□□□ 0.01
SP9P0CG40 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 FKBP4P6-201ENST00000457486 1332 ntBASIC15.11■□□□□ 0.01
SP9P0CG40 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
SP9P0CG40 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 AC055811.4-201ENST00000624039 1754 ntBASIC15.11■□□□□ 0.01
SP9P0CG40 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.11■□□□□ 0.01
SP9P0CG40 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SP9P0CG40 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SP9P0CG40 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SP9P0CG40 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.1■□□□□ 0.01
SP9P0CG40 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SP9P0CG40 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.1■□□□□ 0.01
SP9P0CG40 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SP9P0CG40 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SP9P0CG40 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SP9P0CG40 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.1■□□□□ 0.01
SP9P0CG40 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SP9P0CG40 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.1■□□□□ 0.01
SP9P0CG40 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SP9P0CG40 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SP9P0CG40 AC239868.1-201ENST00000369385 493 ntBASIC15.1■□□□□ 0.01
SP9P0CG40 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.1■□□□□ 0.01
SP9P0CG40 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.1■□□□□ 0.01
SP9P0CG40 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.1■□□□□ 0.01
SP9P0CG40 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.1■□□□□ 0.01
SP9P0CG40 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.1■□□□□ 0.01
SP9P0CG40 FAM58BP-201ENST00000439056 645 ntBASIC15.1■□□□□ 0.01
SP9P0CG40 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.1■□□□□ 0.01
SP9P0CG40 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.1■□□□□ 0.01
SP9P0CG40 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.1■□□□□ 0.01
SP9P0CG40 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.1■□□□□ 0.01
SP9P0CG40 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SP9P0CG40 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.1■□□□□ 0.01
SP9P0CG40 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SP9P0CG40 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms