Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
CCNYL3P0C7X3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 AL512384.1-201ENST00000406683 331 ntBASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 MYCLP2-201ENST00000449268 967 ntBASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 INE1-201ENST00000456273 945 ntBASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 AC104640.1-201ENST00000562617 2109 ntBASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 AC144831.1-201ENST00000573312 2656 ntBASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CCNYL3P0C7X3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 ATP5G2P4-201ENST00000442175 420 ntBASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.18■□□□□ 0.02
CCNYL3P0C7X3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms