Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
FREM3P0C091 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.18□□□□□ -0.14
FREM3P0C091 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.18□□□□□ -0.14
FREM3P0C091 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.18□□□□□ -0.14
FREM3P0C091 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.18□□□□□ -0.14
FREM3P0C091 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FREM3P0C091 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FREM3P0C091 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
FREM3P0C091 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.17□□□□□ -0.14
FREM3P0C091 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.17□□□□□ -0.14
FREM3P0C091 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.17□□□□□ -0.14
FREM3P0C091 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 KRT8P22-201ENST00000562317 1415 ntBASIC14.17□□□□□ -0.14
FREM3P0C091 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.17□□□□□ -0.14
FREM3P0C091 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 AC098614.1-201ENST00000368528 745 ntBASIC14.17□□□□□ -0.14
FREM3P0C091 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.17□□□□□ -0.14
FREM3P0C091 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FREM3P0C091 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.17□□□□□ -0.14
FREM3P0C091 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.17□□□□□ -0.14
FREM3P0C091 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.17□□□□□ -0.14
FREM3P0C091 AL033527.5-201ENST00000641382 801 ntBASIC14.17□□□□□ -0.14
FREM3P0C091 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
FREM3P0C091 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.17□□□□□ -0.14
FREM3P0C091 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.17□□□□□ -0.14
FREM3P0C091 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.17□□□□□ -0.14
FREM3P0C091 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
FREM3P0C091 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.17□□□□□ -0.14
FREM3P0C091 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.17□□□□□ -0.14
FREM3P0C091 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FREM3P0C091 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.17□□□□□ -0.14
FREM3P0C091 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
FREM3P0C091 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.17□□□□□ -0.14
FREM3P0C091 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.17□□□□□ -0.14
FREM3P0C091 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FREM3P0C091 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 AC074338.1-201ENST00000416825 156 ntBASIC14.17□□□□□ -0.14
FREM3P0C091 U91328.1-201ENST00000437528 223 ntBASIC14.17□□□□□ -0.14
FREM3P0C091 INE1-201ENST00000456273 945 ntBASIC14.17□□□□□ -0.14
FREM3P0C091 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FREM3P0C091 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.17□□□□□ -0.14
FREM3P0C091 AC104596.2-201ENST00000512793 793 ntBASIC14.17□□□□□ -0.14
FREM3P0C091 TIMM17BP1-201ENST00000545713 516 ntBASIC14.17□□□□□ -0.14
FREM3P0C091 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.17□□□□□ -0.14
FREM3P0C091 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.17□□□□□ -0.14
FREM3P0C091 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.17□□□□□ -0.14
FREM3P0C091 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.17□□□□□ -0.14
FREM3P0C091 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
FREM3P0C091 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
FREM3P0C091 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
FREM3P0C091 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
FREM3P0C091 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.16□□□□□ -0.14
FREM3P0C091 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.16□□□□□ -0.14
FREM3P0C091 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
FREM3P0C091 TMBIM7P-203ENST00000641617 1718 ntBASIC14.16□□□□□ -0.14
FREM3P0C091 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
FREM3P0C091 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.16□□□□□ -0.14
FREM3P0C091 AL442647.2-201ENST00000429864 857 ntBASIC14.16□□□□□ -0.14
FREM3P0C091 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.16□□□□□ -0.14
FREM3P0C091 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.16□□□□□ -0.14
FREM3P0C091 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.16□□□□□ -0.14
FREM3P0C091 FTH1P14-201ENST00000482930 551 ntBASIC14.16□□□□□ -0.14
FREM3P0C091 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
FREM3P0C091 RPSAP52-203ENST00000622976 1023 ntBASIC14.16□□□□□ -0.14
FREM3P0C091 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
FREM3P0C091 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.16□□□□□ -0.14
FREM3P0C091 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms