Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AC116353.5-201ENST00000638148 1699 ntBASIC18.38■□□□□ 0.53
MYCNP04198 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.38■□□□□ 0.53
MYCNP04198 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.38■□□□□ 0.53
MYCNP04198 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.38■□□□□ 0.53
MYCNP04198 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
MYCNP04198 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
MYCNP04198 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.38■□□□□ 0.53
MYCNP04198 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
MYCNP04198 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.38■□□□□ 0.53
MYCNP04198 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 FGF1-206ENST00000407758 759 ntTSL 5 BASIC18.38■□□□□ 0.53
MYCNP04198 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC18.38■□□□□ 0.53
MYCNP04198 AC092634.2-201ENST00000428146 1010 ntBASIC18.38■□□□□ 0.53
MYCNP04198 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC18.38■□□□□ 0.53
MYCNP04198 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC18.38■□□□□ 0.53
MYCNP04198 CCDC144NL-AS1-206ENST00000443508 1216 ntTSL 3 BASIC18.38■□□□□ 0.53
MYCNP04198 RN7SL837P-201ENST00000463010 287 ntBASIC18.38■□□□□ 0.53
MYCNP04198 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC18.38■□□□□ 0.53
MYCNP04198 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.38■□□□□ 0.53
MYCNP04198 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.38■□□□□ 0.53
MYCNP04198 AP001505.1-201ENST00000569966 824 ntBASIC18.38■□□□□ 0.53
MYCNP04198 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.38■□□□□ 0.53
MYCNP04198 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.38■□□□□ 0.53
MYCNP04198 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.38■□□□□ 0.53
MYCNP04198 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.38■□□□□ 0.53
MYCNP04198 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MYCNP04198 DDX43P2-201ENST00000604753 1354 ntBASIC18.38■□□□□ 0.53
MYCNP04198 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
MYCNP04198 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.38■□□□□ 0.53
MYCNP04198 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.37■□□□□ 0.53
MYCNP04198 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.37■□□□□ 0.53
MYCNP04198 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.37■□□□□ 0.53
MYCNP04198 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
MYCNP04198 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.37■□□□□ 0.53
MYCNP04198 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.37■□□□□ 0.53
MYCNP04198 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.37■□□□□ 0.53
MYCNP04198 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.37■□□□□ 0.53
MYCNP04198 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
MYCNP04198 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
MYCNP04198 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC18.37■□□□□ 0.53
MYCNP04198 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.37■□□□□ 0.53
MYCNP04198 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
MYCNP04198 AP000688.3-201ENST00000445464 348 ntTSL 3 BASIC18.37■□□□□ 0.53
MYCNP04198 SERBP1P3-201ENST00000459980 809 ntBASIC18.37■□□□□ 0.53
MYCNP04198 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.37■□□□□ 0.53
MYCNP04198 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC18.37■□□□□ 0.53
MYCNP04198 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC18.37■□□□□ 0.53
MYCNP04198 C14orf159-210ENST00000518665 959 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 AC105233.3-201ENST00000531125 744 ntBASIC18.37■□□□□ 0.53
MYCNP04198 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.37■□□□□ 0.53
MYCNP04198 AP003497.2-201ENST00000624220 967 ntBASIC18.37■□□□□ 0.53
MYCNP04198 AC098679.4-201ENST00000624241 654 ntBASIC18.37■□□□□ 0.53
MYCNP04198 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.37■□□□□ 0.53
MYCNP04198 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
MYCNP04198 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.37■□□□□ 0.53
MYCNP04198 SLC7A15P-201ENST00000424028 1363 ntBASIC18.37■□□□□ 0.53
MYCNP04198 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MYCNP04198 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms