Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
VTNP04004 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.04■□□□□ 0.32
VTNP04004 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VTNP04004 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.04■□□□□ 0.32
VTNP04004 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.04■□□□□ 0.32
VTNP04004 AC092658.1-201ENST00000505836 891 ntBASIC17.04■□□□□ 0.32
VTNP04004 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.04■□□□□ 0.32
VTNP04004 KRT90P-201ENST00000549264 1064 ntBASIC17.04■□□□□ 0.32
VTNP04004 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.04■□□□□ 0.32
VTNP04004 AP005019.2-201ENST00000615104 511 ntBASIC17.04■□□□□ 0.32
VTNP04004 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.04■□□□□ 0.32
VTNP04004 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VTNP04004 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.04■□□□□ 0.32
VTNP04004 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.04■□□□□ 0.32
VTNP04004 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.04■□□□□ 0.32
VTNP04004 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
VTNP04004 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.04■□□□□ 0.32
VTNP04004 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VTNP04004 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
VTNP04004 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.04■□□□□ 0.32
VTNP04004 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.03■□□□□ 0.32
VTNP04004 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
VTNP04004 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.03■□□□□ 0.32
VTNP04004 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.03■□□□□ 0.32
VTNP04004 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
VTNP04004 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VTNP04004 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
VTNP04004 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
VTNP04004 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.03■□□□□ 0.32
VTNP04004 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.03■□□□□ 0.32
VTNP04004 AL583810.1-201ENST00000553344 1045 ntBASIC17.03■□□□□ 0.32
VTNP04004 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.03■□□□□ 0.32
VTNP04004 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
VTNP04004 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.03■□□□□ 0.32
VTNP04004 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
VTNP04004 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
VTNP04004 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VTNP04004 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.03■□□□□ 0.32
VTNP04004 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VTNP04004 AC084364.1-201ENST00000551967 1556 ntBASIC17.02■□□□□ 0.32
VTNP04004 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTNP04004 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTNP04004 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VTNP04004 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
VTNP04004 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTNP04004 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTNP04004 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTNP04004 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTNP04004 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.02■□□□□ 0.32
VTNP04004 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTNP04004 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTNP04004 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTNP04004 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.02■□□□□ 0.32
VTNP04004 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.02■□□□□ 0.32
VTNP04004 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.02■□□□□ 0.32
VTNP04004 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VTNP04004 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.02■□□□□ 0.32
VTNP04004 AC026954.1-201ENST00000429771 1293 ntBASIC17.02■□□□□ 0.32
VTNP04004 C2orf27AP3-201ENST00000434123 579 ntBASIC17.02■□□□□ 0.32
VTNP04004 FO681548.1-201ENST00000455617 1132 ntBASIC17.02■□□□□ 0.32
VTNP04004 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.02■□□□□ 0.32
VTNP04004 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.02■□□□□ 0.32
VTNP04004 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VTNP04004 KRT18P25-201ENST00000508931 1278 ntBASIC17.02■□□□□ 0.32
VTNP04004 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.02■□□□□ 0.32
VTNP04004 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.02■□□□□ 0.32
VTNP04004 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms