Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDLRP01130 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDLRP01130 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.22■□□□□ 0.03
LDLRP01130 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.22■□□□□ 0.03
LDLRP01130 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LDLRP01130 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.22■□□□□ 0.03
LDLRP01130 AC007326.2-201ENST00000624224 7579 ntBASIC15.22■□□□□ 0.03
LDLRP01130 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.22■□□□□ 0.03
LDLRP01130 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LDLRP01130 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDLRP01130 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.22■□□□□ 0.03
LDLRP01130 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
LDLRP01130 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.22■□□□□ 0.03
LDLRP01130 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LDLRP01130 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LDLRP01130 IGHV3-42-201ENST00000520410 361 ntBASIC15.22■□□□□ 0.03
LDLRP01130 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.22■□□□□ 0.03
LDLRP01130 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.22■□□□□ 0.03
LDLRP01130 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LDLRP01130 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDLRP01130 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.22■□□□□ 0.03
LDLRP01130 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LDLRP01130 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LDLRP01130 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDLRP01130 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDLRP01130 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDLRP01130 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.22■□□□□ 0.03
LDLRP01130 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LDLRP01130 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
LDLRP01130 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
LDLRP01130 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDLRP01130 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LDLRP01130 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.22■□□□□ 0.03
LDLRP01130 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LDLRP01130 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
LDLRP01130 AC026748.1-201ENST00000624349 3251 ntBASIC15.21■□□□□ 0.03
LDLRP01130 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LDLRP01130 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.21■□□□□ 0.03
LDLRP01130 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.21■□□□□ 0.03
LDLRP01130 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LDLRP01130 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDLRP01130 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
LDLRP01130 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDLRP01130 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDLRP01130 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDLRP01130 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDLRP01130 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDLRP01130 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDLRP01130 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LDLRP01130 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.21■□□□□ 0.03
LDLRP01130 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.21■□□□□ 0.03
LDLRP01130 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDLRP01130 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.21■□□□□ 0.03
LDLRP01130 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LDLRP01130 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LDLRP01130 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LDLRP01130 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LDLRP01130 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.21■□□□□ 0.03
LDLRP01130 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.21■□□□□ 0.03
LDLRP01130 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.21■□□□□ 0.03
LDLRP01130 RBPMS2P1-201ENST00000437762 623 ntBASIC15.21■□□□□ 0.03
LDLRP01130 AC140658.5-201ENST00000438532 169 ntBASIC15.21■□□□□ 0.03
LDLRP01130 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.21■□□□□ 0.03
LDLRP01130 AL512638.1-201ENST00000457493 794 ntBASIC15.21■□□□□ 0.03
LDLRP01130 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.21■□□□□ 0.03
LDLRP01130 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.21■□□□□ 0.03
LDLRP01130 AC243562.1-201ENST00000560672 389 ntBASIC15.21■□□□□ 0.03
LDLRP01130 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDLRP01130 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.21■□□□□ 0.03
LDLRP01130 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LDLRP01130 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.21■□□□□ 0.03
LDLRP01130 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDLRP01130 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LDLRP01130 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.21■□□□□ 0.02
LDLRP01130 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LDLRP01130 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LDLRP01130 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LDLRP01130 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
LDLRP01130 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LDLRP01130 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.02
LDLRP01130 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDLRP01130 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.2■□□□□ 0.02
LDLRP01130 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LDLRP01130 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDLRP01130 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LDLRP01130 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDLRP01130 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDLRP01130 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.2■□□□□ 0.02
LDLRP01130 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LDLRP01130 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.2■□□□□ 0.02
LDLRP01130 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.2■□□□□ 0.02
LDLRP01130 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.2■□□□□ 0.02
LDLRP01130 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.2■□□□□ 0.02
LDLRP01130 AL158211.3-201ENST00000607385 239 ntBASIC15.2■□□□□ 0.02
LDLRP01130 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LDLRP01130 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
LDLRP01130 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.2■□□□□ 0.02
LDLRP01130 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.2■□□□□ 0.02
LDLRP01130 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.2■□□□□ 0.02
LDLRP01130 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms