Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF113AO15541 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF113AO15541 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF113AO15541 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF113AO15541 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.67■□□□□ 0.58
RNF113AO15541 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF113AO15541 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF113AO15541 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.67■□□□□ 0.58
RNF113AO15541 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF113AO15541 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF113AO15541 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF113AO15541 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF113AO15541 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RNF113AO15541 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF113AO15541 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF113AO15541 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF113AO15541 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF113AO15541 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF113AO15541 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF113AO15541 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF113AO15541 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF113AO15541 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF113AO15541 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.67■□□□□ 0.58
RNF113AO15541 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RNF113AO15541 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF113AO15541 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RNF113AO15541 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF113AO15541 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RNF113AO15541 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF113AO15541 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RNF113AO15541 AC098614.1-201ENST00000368528 745 ntBASIC18.66■□□□□ 0.58
RNF113AO15541 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 C1QBPP1-201ENST00000400117 770 ntBASIC18.66■□□□□ 0.58
RNF113AO15541 AP006294.1-201ENST00000415407 339 ntBASIC18.66■□□□□ 0.58
RNF113AO15541 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.66■□□□□ 0.58
RNF113AO15541 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF113AO15541 AC133539.2-201ENST00000604757 467 ntBASIC18.66■□□□□ 0.58
RNF113AO15541 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF113AO15541 AL645728.2-202ENST00000641679 227 ntBASIC18.66■□□□□ 0.58
RNF113AO15541 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RNF113AO15541 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 KRT8P44-201ENST00000441609 1350 ntBASIC18.66■□□□□ 0.58
RNF113AO15541 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF113AO15541 AC022532.1-201ENST00000624563 1728 ntBASIC18.66■□□□□ 0.58
RNF113AO15541 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
RNF113AO15541 HYMAI-201ENST00000635591 3347 ntBASIC18.66■□□□□ 0.58
RNF113AO15541 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF113AO15541 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF113AO15541 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF113AO15541 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF113AO15541 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF113AO15541 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF113AO15541 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF113AO15541 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF113AO15541 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF113AO15541 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF113AO15541 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF113AO15541 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF113AO15541 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF113AO15541 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF113AO15541 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF113AO15541 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF113AO15541 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF113AO15541 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF113AO15541 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF113AO15541 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF113AO15541 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF113AO15541 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF113AO15541 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF113AO15541 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF113AO15541 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF113AO15541 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
RNF113AO15541 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF113AO15541 AC093813.1-201ENST00000605066 256 ntBASIC18.65■□□□□ 0.58
RNF113AO15541 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
RNF113AO15541 AL033527.5-201ENST00000641382 801 ntBASIC18.65■□□□□ 0.58
RNF113AO15541 AL358472.5-202ENST00000641448 1267 ntBASIC18.65■□□□□ 0.58
RNF113AO15541 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF113AO15541 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF113AO15541 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
RNF113AO15541 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF113AO15541 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF113AO15541 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF113AO15541 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF113AO15541 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF113AO15541 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms