Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CHD2O14647 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC21.1■□□□□ 0.97
CHD2O14647 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD2O14647 AC239868.1-201ENST00000369385 493 ntBASIC21.1■□□□□ 0.97
CHD2O14647 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC21.1■□□□□ 0.97
CHD2O14647 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC21.1■□□□□ 0.97
CHD2O14647 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CHD2O14647 PHBP15-201ENST00000574228 665 ntBASIC21.1■□□□□ 0.97
CHD2O14647 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC21.1■□□□□ 0.97
CHD2O14647 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC21.1■□□□□ 0.97
CHD2O14647 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CHD2O14647 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD2O14647 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHD2O14647 ILF3-AS1-201ENST00000591501 1983 ntBASIC21.09■□□□□ 0.97
CHD2O14647 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD2O14647 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CHD2O14647 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD2O14647 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.09■□□□□ 0.97
CHD2O14647 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHD2O14647 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHD2O14647 RPL5P21-201ENST00000404620 815 ntBASIC21.09■□□□□ 0.97
CHD2O14647 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC21.09■□□□□ 0.97
CHD2O14647 AC012362.1-201ENST00000434906 739 ntBASIC21.09■□□□□ 0.97
CHD2O14647 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC21.09■□□□□ 0.97
CHD2O14647 AC026410.1-201ENST00000507366 1101 ntBASIC21.09■□□□□ 0.97
CHD2O14647 POU5F1P2-201ENST00000521750 823 ntBASIC21.09■□□□□ 0.97
CHD2O14647 AL022344.2-201ENST00000568976 968 ntBASIC21.09■□□□□ 0.97
CHD2O14647 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CHD2O14647 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC21.09■□□□□ 0.97
CHD2O14647 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CHD2O14647 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC21.09■□□□□ 0.97
CHD2O14647 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CHD2O14647 REXO1L5P-201ENST00000622260 2098 ntBASIC21.09■□□□□ 0.97
CHD2O14647 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.09■□□□□ 0.97
CHD2O14647 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CHD2O14647 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC21.09■□□□□ 0.97
CHD2O14647 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.09■□□□□ 0.97
CHD2O14647 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
CHD2O14647 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC21.08■□□□□ 0.97
CHD2O14647 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC21.08■□□□□ 0.97
CHD2O14647 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC21.08■□□□□ 0.97
CHD2O14647 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CHD2O14647 KRT8P31-201ENST00000504812 1408 ntBASIC21.08■□□□□ 0.97
CHD2O14647 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
CHD2O14647 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD2O14647 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CHD2O14647 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD2O14647 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CHD2O14647 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHD2O14647 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD2O14647 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD2O14647 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CHD2O14647 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHD2O14647 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHD2O14647 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHD2O14647 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHD2O14647 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC21.08■□□□□ 0.96
CHD2O14647 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHD2O14647 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC21.08■□□□□ 0.96
CHD2O14647 ALG3P1-201ENST00000508806 1114 ntBASIC21.08■□□□□ 0.96
CHD2O14647 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHD2O14647 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC21.08■□□□□ 0.96
CHD2O14647 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC21.08■□□□□ 0.96
CHD2O14647 MIR4522-201ENST00000584932 87 ntBASIC21.08■□□□□ 0.96
CHD2O14647 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC21.08■□□□□ 0.96
CHD2O14647 MIR6858-201ENST00000620733 67 ntBASIC21.08■□□□□ 0.96
CHD2O14647 AC073911.3-201ENST00000624401 631 ntBASIC21.08■□□□□ 0.96
CHD2O14647 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC21.08■□□□□ 0.96
CHD2O14647 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHD2O14647 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHD2O14647 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CHD2O14647 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHD2O14647 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CHD2O14647 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHD2O14647 PGR-209ENST00000617858 2816 ntTSL 5 BASIC21.08■□□□□ 0.96
CHD2O14647 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHD2O14647 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD2O14647 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CHD2O14647 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHD2O14647 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHD2O14647 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC21.07■□□□□ 0.96
CHD2O14647 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC21.07■□□□□ 0.96
CHD2O14647 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC21.07■□□□□ 0.96
CHD2O14647 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CHD2O14647 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC21.07■□□□□ 0.96
CHD2O14647 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC21.07■□□□□ 0.96
CHD2O14647 AC026434.2-201ENST00000506094 1078 ntBASIC21.07■□□□□ 0.96
CHD2O14647 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHD2O14647 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC21.07■□□□□ 0.96
CHD2O14647 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHD2O14647 AL132780.4-201ENST00000624870 1135 ntBASIC21.07■□□□□ 0.96
CHD2O14647 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD2O14647 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC21.07■□□□□ 0.96
CHD2O14647 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD2O14647 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD2O14647 FRMPD2B-201ENST00000431305 1347 ntBASIC21.07■□□□□ 0.96
CHD2O14647 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC21.07■□□□□ 0.96
CHD2O14647 REXO1L4P-201ENST00000605109 1937 ntBASIC21.07■□□□□ 0.96
CHD2O14647 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD2O14647 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms