Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
UPK1AO00322 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
UPK1AO00322 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.84□□□□□ -0.03
UPK1AO00322 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
UPK1AO00322 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 FO393414.2-201ENST00000405153 598 ntBASIC14.84□□□□□ -0.03
UPK1AO00322 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.84□□□□□ -0.03
UPK1AO00322 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK1AO00322 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.84□□□□□ -0.03
UPK1AO00322 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK1AO00322 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK1AO00322 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.84□□□□□ -0.03
UPK1AO00322 AL079307.3-201ENST00000556114 283 ntBASIC14.84□□□□□ -0.03
UPK1AO00322 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.84□□□□□ -0.03
UPK1AO00322 AC097359.3-201ENST00000603982 1210 ntBASIC14.84□□□□□ -0.03
UPK1AO00322 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK1AO00322 AC139530.3-201ENST00000620344 690 ntBASIC14.84□□□□□ -0.03
UPK1AO00322 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.84□□□□□ -0.03
UPK1AO00322 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 AC127383.1-201ENST00000444697 1800 ntBASIC14.84□□□□□ -0.03
UPK1AO00322 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.84□□□□□ -0.03
UPK1AO00322 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
UPK1AO00322 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.84□□□□□ -0.03
UPK1AO00322 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
UPK1AO00322 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.84□□□□□ -0.03
UPK1AO00322 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK1AO00322 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
UPK1AO00322 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
UPK1AO00322 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
UPK1AO00322 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
UPK1AO00322 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.83□□□□□ -0.03
UPK1AO00322 AC007686.3-201ENST00000619017 3487 ntBASIC14.83□□□□□ -0.03
UPK1AO00322 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
UPK1AO00322 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
UPK1AO00322 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.83□□□□□ -0.03
UPK1AO00322 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1AO00322 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1AO00322 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
UPK1AO00322 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1AO00322 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1AO00322 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1AO00322 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1AO00322 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1AO00322 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.83□□□□□ -0.04
UPK1AO00322 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.83□□□□□ -0.04
UPK1AO00322 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.83□□□□□ -0.04
UPK1AO00322 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1AO00322 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.83□□□□□ -0.04
UPK1AO00322 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.83□□□□□ -0.04
UPK1AO00322 Z92544.3-201ENST00000624747 417 ntBASIC14.83□□□□□ -0.04
UPK1AO00322 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.83□□□□□ -0.04
UPK1AO00322 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1AO00322 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1AO00322 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
UPK1AO00322 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
UPK1AO00322 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1AO00322 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
UPK1AO00322 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1AO00322 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1AO00322 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.83□□□□□ -0.04
UPK1AO00322 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1AO00322 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1AO00322 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.82□□□□□ -0.04
UPK1AO00322 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.82□□□□□ -0.04
UPK1AO00322 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
UPK1AO00322 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.82□□□□□ -0.04
UPK1AO00322 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
UPK1AO00322 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 AC023024.2-201ENST00000623561 1993 ntBASIC14.82□□□□□ -0.04
UPK1AO00322 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.82□□□□□ -0.04
UPK1AO00322 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.82□□□□□ -0.04
UPK1AO00322 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.82□□□□□ -0.04
UPK1AO00322 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms