Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PDLIM1O00151 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15□□□□□ -0.01
PDLIM1O00151 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
PDLIM1O00151 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
PDLIM1O00151 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15□□□□□ -0.01
PDLIM1O00151 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
PDLIM1O00151 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM1O00151 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
PDLIM1O00151 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.99□□□□□ -0.01
PDLIM1O00151 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.99□□□□□ -0.01
PDLIM1O00151 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.99□□□□□ -0.01
PDLIM1O00151 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.99□□□□□ -0.01
PDLIM1O00151 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
PDLIM1O00151 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.99□□□□□ -0.01
PDLIM1O00151 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PDLIM1O00151 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.99□□□□□ -0.01
PDLIM1O00151 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
PDLIM1O00151 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
PDLIM1O00151 HCG4-201ENST00000418983 998 ntBASIC14.99□□□□□ -0.01
PDLIM1O00151 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.99□□□□□ -0.01
PDLIM1O00151 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 KRT18P3-201ENST00000451602 1288 ntBASIC14.99□□□□□ -0.01
PDLIM1O00151 PGAM5P1-201ENST00000518923 814 ntBASIC14.99□□□□□ -0.01
PDLIM1O00151 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.99□□□□□ -0.01
PDLIM1O00151 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.99□□□□□ -0.01
PDLIM1O00151 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.99□□□□□ -0.01
PDLIM1O00151 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.99□□□□□ -0.01
PDLIM1O00151 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.99□□□□□ -0.01
PDLIM1O00151 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.99□□□□□ -0.01
PDLIM1O00151 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.99□□□□□ -0.01
PDLIM1O00151 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
PDLIM1O00151 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.99□□□□□ -0.01
PDLIM1O00151 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.99□□□□□ -0.01
PDLIM1O00151 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM1O00151 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.98□□□□□ -0.01
PDLIM1O00151 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM1O00151 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM1O00151 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM1O00151 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM1O00151 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
PDLIM1O00151 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PDLIM1O00151 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM1O00151 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM1O00151 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.98□□□□□ -0.01
PDLIM1O00151 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.98□□□□□ -0.01
PDLIM1O00151 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM1O00151 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PDLIM1O00151 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM1O00151 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PDLIM1O00151 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM1O00151 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM1O00151 AJ011931.1-201ENST00000618749 2492 ntBASIC14.98□□□□□ -0.01
PDLIM1O00151 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.98□□□□□ -0.01
PDLIM1O00151 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
PDLIM1O00151 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
PDLIM1O00151 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PDLIM1O00151 AC007967.2-201ENST00000432613 625 ntBASIC14.98□□□□□ -0.01
PDLIM1O00151 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.98□□□□□ -0.01
PDLIM1O00151 KRT18P2-201ENST00000447938 1258 ntBASIC14.98□□□□□ -0.01
PDLIM1O00151 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.98□□□□□ -0.01
PDLIM1O00151 POLD2P1-201ENST00000511220 997 ntBASIC14.98□□□□□ -0.01
PDLIM1O00151 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
PDLIM1O00151 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM1O00151 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM1O00151 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM1O00151 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM1O00151 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.98□□□□□ -0.01
PDLIM1O00151 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PDLIM1O00151 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDLIM1O00151 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
PDLIM1O00151 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms