Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 TMEM261P1-201ENST00000604899 340 ntBASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 WFDC1-204ENST00000613603 549 ntBASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPA3F8WFD2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
NPIPA3F8WFD2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.27□□□□□ -0.12
NPIPA3F8WFD2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPA3F8WFD2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
NPIPA3F8WFD2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPA3F8WFD2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.27□□□□□ -0.12
NPIPA3F8WFD2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.27□□□□□ -0.12
NPIPA3F8WFD2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.27□□□□□ -0.12
NPIPA3F8WFD2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.27□□□□□ -0.12
NPIPA3F8WFD2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.27□□□□□ -0.12
NPIPA3F8WFD2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
NPIPA3F8WFD2 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPA3F8WFD2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 AC007274.1-201ENST00000439805 662 ntBASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 TARDBPP1-201ENST00000442013 1203 ntBASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 RN7SL399P-201ENST00000471648 279 ntBASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 AC036164.1-201ENST00000570544 333 ntBASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 AL033527.5-201ENST00000641382 801 ntBASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 REXO1L1P-202ENST00000608646 1974 ntBASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPA3F8WFD2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 KRT17P8-201ENST00000540749 863 ntBASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms