Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 SPTSSB-204ENST00000617024 1292 ntBASIC11.01□□□□□ -0.65
LINC01546A6NGU7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 AC116407.4-201ENST00000623319 1061 ntBASIC11.01□□□□□ -0.65
LINC01546A6NGU7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 AL136982.4-201ENST00000437689 1740 ntBASIC11.01□□□□□ -0.65
LINC01546A6NGU7 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
LINC01546A6NGU7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
LINC01546A6NGU7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11□□□□□ -0.65
LINC01546A6NGU7 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
LINC01546A6NGU7 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
LINC01546A6NGU7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11□□□□□ -0.65
LINC01546A6NGU7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
LINC01546A6NGU7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 AC090505.1-201ENST00000430515 1834 ntBASIC11□□□□□ -0.65
LINC01546A6NGU7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
LINC01546A6NGU7 TCAM1P-207ENST00000485295 1537 ntBASIC11□□□□□ -0.65
LINC01546A6NGU7 PCDHA3-202ENST00000532566 4594 ntBASIC11□□□□□ -0.65
LINC01546A6NGU7 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11□□□□□ -0.65
LINC01546A6NGU7 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
LINC01546A6NGU7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC11□□□□□ -0.65
LINC01546A6NGU7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11□□□□□ -0.65
LINC01546A6NGU7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
LINC01546A6NGU7 AL607033.1-201ENST00000623900 1599 ntBASIC11□□□□□ -0.65
LINC01546A6NGU7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC11□□□□□ -0.65
LINC01546A6NGU7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 MAPT-IT1-201ENST00000624111 3016 ntBASIC11□□□□□ -0.65
LINC01546A6NGU7 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC11□□□□□ -0.65
LINC01546A6NGU7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
LINC01546A6NGU7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11□□□□□ -0.65
LINC01546A6NGU7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms