Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
SHISA3A0PJX4 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.65□□□□□ -0.23
SHISA3A0PJX4 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.23
SHISA3A0PJX4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
SHISA3A0PJX4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 CICP17-201ENST00000418553 2377 ntBASIC13.64□□□□□ -0.23
SHISA3A0PJX4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 AL691432.3-201ENST00000621860 400 ntBASIC13.64□□□□□ -0.23
SHISA3A0PJX4 AC148477.8-201ENST00000624298 468 ntBASIC13.64□□□□□ -0.23
SHISA3A0PJX4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHISA3A0PJX4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 RPL5P21-201ENST00000404620 815 ntBASIC13.63□□□□□ -0.23
SHISA3A0PJX4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 AL450487.1-201ENST00000426799 995 ntBASIC13.63□□□□□ -0.23
SHISA3A0PJX4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 PRELID1P1-202ENST00000567272 903 ntBASIC13.63□□□□□ -0.23
SHISA3A0PJX4 AC024267.1-201ENST00000582320 895 ntBASIC13.63□□□□□ -0.23
SHISA3A0PJX4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 SPTSSB-204ENST00000617024 1292 ntBASIC13.63□□□□□ -0.23
SHISA3A0PJX4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms