Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 BX640514.1-201ENST00000583223 1918 ntBASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 GHSR-202ENST00000427970 912 ntBASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 HCG4B-203ENST00000450128 991 ntBASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 UNC93B6-202ENST00000528242 690 ntBASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 HNRNPUP1-201ENST00000554987 333 ntBASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 AC097359.3-201ENST00000603982 1210 ntBASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 AC010507.1-201ENST00000633895 436 ntBASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DUXBA0A1W2PPF3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 AC139749.1-202ENST00000617529 3139 ntBASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 AC136604.1-201ENST00000418535 575 ntBASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 AL139010.1-201ENST00000454878 894 ntBASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 ST20-AS1-201ENST00000560255 4223 ntBASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DUXBA0A1W2PPF3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms