Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC104596.2-201ENST00000512793 793 ntBASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV5-4A0A0C4DH59 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 INTS4P2-202ENST00000614726 2019 ntBASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC006058.4-201ENST00000624016 1670 ntBASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 WASH3P-207ENST00000560956 1394 ntBASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC093525.8-201ENST00000624099 1342 ntBASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC120045.2-201ENST00000567334 178 ntBASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC124283.3-201ENST00000570869 594 ntBASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 SAMD11P1-201ENST00000571429 661 ntBASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 SPDYE22P-201ENST00000582158 798 ntBASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC092364.2-202ENST00000597012 1073 ntBASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC093813.1-201ENST00000605066 256 ntBASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC007431.3-201ENST00000623221 587 ntBASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC091951.1-201ENST00000512854 2465 ntBASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-4A0A0C4DH59 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 REXO1L4P-201ENST00000605109 1937 ntBASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV5-4A0A0C4DH59 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms