Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 REXO1L1P-202ENST00000608646 1974 ntBASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 KRT8P37-201ENST00000451609 1420 ntBASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 TSEN15P1-201ENST00000423257 515 ntBASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 HLA-J-203ENST00000494367 1087 ntBASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.86□□□□□ -0.51
HLA-DRB4X5D2U9 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 LINC01101-201ENST00000622953 1884 ntBASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 CNN2P2-201ENST00000443536 909 ntBASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 CNN2P3-201ENST00000450201 906 ntBASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 AC069262.1-201ENST00000539058 672 ntBASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 BANF1P1-201ENST00000553684 263 ntBASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 MIR4453-201ENST00000584019 89 ntBASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 AP001160.2-201ENST00000596071 487 ntBASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 AL136317.3-201ENST00000618497 906 ntBASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms