Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 AL512361.1-201ENST00000554200 418 ntBASIC17.86■□□□□ 0.45
CLIC4Q9Y696 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 MIR6069-201ENST00000620069 79 ntBASIC17.86■□□□□ 0.45
CLIC4Q9Y696 Z92544.3-201ENST00000624747 417 ntBASIC17.86■□□□□ 0.45
CLIC4Q9Y696 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLIC4Q9Y696 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 LINC01115-203ENST00000606068 577 ntBASIC17.85■□□□□ 0.45
CLIC4Q9Y696 TEX28P1-201ENST00000613479 1221 ntBASIC17.85■□□□□ 0.45
CLIC4Q9Y696 AL138828.2-201ENST00000615812 383 ntBASIC17.85■□□□□ 0.45
CLIC4Q9Y696 TEX28P2-201ENST00000617764 1221 ntBASIC17.85■□□□□ 0.45
CLIC4Q9Y696 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLIC4Q9Y696 AJ011931.1-201ENST00000618749 2492 ntBASIC17.84■□□□□ 0.45
CLIC4Q9Y696 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 AC099063.4-201ENST00000641099 1602 ntBASIC17.84■□□□□ 0.45
CLIC4Q9Y696 MROH4P-201ENST00000431302 1578 ntBASIC17.84■□□□□ 0.45
CLIC4Q9Y696 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 TSEN15P1-201ENST00000423257 515 ntBASIC17.84■□□□□ 0.45
CLIC4Q9Y696 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 SLED1-202ENST00000512051 380 ntBASIC17.84■□□□□ 0.45
CLIC4Q9Y696 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.84■□□□□ 0.45
CLIC4Q9Y696 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLIC4Q9Y696 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms