Protein–RNA interactions for Protein: Q9Y2W1

THRAP3, Thyroid hormone receptor-associated protein 3, humanhuman

Known RBP Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP3Q9Y2W1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 TBC1D3J-201ENST00000620719 1426 ntBASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 SHC1P1-201ENST00000425230 1745 ntBASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 RN7SKP175-201ENST00000408472 289 ntBASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 RPL13AP19-201ENST00000434320 584 ntBASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 AC073150.1-201ENST00000450406 1084 ntBASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 AC132192.2-201ENST00000596206 1147 ntBASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 AC103810.10-201ENST00000606504 343 ntBASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 AC084364.1-201ENST00000551967 1556 ntBASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
THRAP3Q9Y2W1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
THRAP3Q9Y2W1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
THRAP3Q9Y2W1 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC20.02■□□□□ 0.79
THRAP3Q9Y2W1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 POU5F1P2-201ENST00000521750 823 ntBASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 AP001065.2-201ENST00000617205 644 ntBASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THRAP3Q9Y2W1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
THRAP3Q9Y2W1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THRAP3Q9Y2W1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
THRAP3Q9Y2W1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
THRAP3Q9Y2W1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20■□□□□ 0.79
THRAP3Q9Y2W1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THRAP3Q9Y2W1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20■□□□□ 0.79
THRAP3Q9Y2W1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
THRAP3Q9Y2W1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THRAP3Q9Y2W1 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC20■□□□□ 0.79
THRAP3Q9Y2W1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20■□□□□ 0.79
THRAP3Q9Y2W1 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THRAP3Q9Y2W1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THRAP3Q9Y2W1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms