Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.45□□□□□ -0.1
RPH3AQ9Y2J0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 NME2P1-201ENST00000426182 414 ntBASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 AC027307.3-201ENST00000594262 1100 ntBASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPH3AQ9Y2J0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
RPH3AQ9Y2J0 AL450472.2-201ENST00000603663 1156 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms