Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 MAGEA7P-201ENST00000436482 942 ntBASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 RN7SL23P-201ENST00000484055 275 ntBASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 AC226150.1-201ENST00000544259 466 ntBASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 AC133540.1-201ENST00000620845 1019 ntBASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
RIMBP3Q9UFD9 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC23.89■■□□□ 1.42
RIMBP3Q9UFD9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
RIMBP3Q9UFD9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RIMBP3Q9UFD9 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.42
RIMBP3Q9UFD9 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC23.89■■□□□ 1.42
RIMBP3Q9UFD9 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC23.89■■□□□ 1.42
RIMBP3Q9UFD9 GNG10P1-201ENST00000452289 199 ntBASIC23.89■■□□□ 1.42
RIMBP3Q9UFD9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC23.89■■□□□ 1.42
RIMBP3Q9UFD9 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC23.89■■□□□ 1.42
RIMBP3Q9UFD9 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC23.89■■□□□ 1.42
RIMBP3Q9UFD9 AC008972.2-201ENST00000606587 494 ntBASIC23.89■■□□□ 1.42
RIMBP3Q9UFD9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
RIMBP3Q9UFD9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RIMBP3Q9UFD9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC23.89■■□□□ 1.41
RIMBP3Q9UFD9 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
RIMBP3Q9UFD9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RIMBP3Q9UFD9 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 AC144522.1-201ENST00000625111 1658 ntBASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 CASP2-203ENST00000392925 616 ntTSL 3 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 GOLGA2P7-209ENST00000560408 745 ntBASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 XBP1P1-201ENST00000436573 652 ntBASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 AC078814.4-201ENST00000546650 327 ntBASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 AC124068.2-201ENST00000569473 1109 ntBASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 AL022334.2-201ENST00000610000 484 ntBASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC23.88■■□□□ 1.41
RIMBP3Q9UFD9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 AL360270.3-201ENST00000609118 1348 ntBASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 RN7SL69P-201ENST00000468423 272 ntBASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms