Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
PARPBPQ9NWS1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.08□□□□□ -0.15
PARPBPQ9NWS1 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
PARPBPQ9NWS1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.08□□□□□ -0.15
PARPBPQ9NWS1 AL365203.3-201ENST00000609742 2057 ntBASIC14.08□□□□□ -0.15
PARPBPQ9NWS1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 AC136604.1-201ENST00000418535 575 ntBASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 AC009477.1-201ENST00000452936 217 ntBASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 TIMM17BP1-201ENST00000545713 516 ntBASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 AL512361.1-201ENST00000554200 418 ntBASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 AL096865.1-201ENST00000606796 927 ntBASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 AL844908.2-201ENST00000609461 460 ntBASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 AC074044.1-201ENST00000609673 707 ntBASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 Z97205.2-201ENST00000564697 1639 ntBASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.08□□□□□ -0.16
PARPBPQ9NWS1 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms