Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 DUX4L45-201ENST00000566406 1057 ntBASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FBXO28Q9NVF7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 AC084364.1-201ENST00000551967 1556 ntBASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 RN7SL560P-201ENST00000577943 264 ntBASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 MIR6787-201ENST00000616675 61 ntBASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FBXO28Q9NVF7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
FBXO28Q9NVF7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.83■□□□□ 0.45
FBXO28Q9NVF7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FBXO28Q9NVF7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.83■□□□□ 0.45
FBXO28Q9NVF7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
FBXO28Q9NVF7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FBXO28Q9NVF7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
FBXO28Q9NVF7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
FBXO28Q9NVF7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FBXO28Q9NVF7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
FBXO28Q9NVF7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.83■□□□□ 0.45
FBXO28Q9NVF7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
FBXO28Q9NVF7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FBXO28Q9NVF7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FBXO28Q9NVF7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
FBXO28Q9NVF7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FBXO28Q9NVF7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FBXO28Q9NVF7 ACTBP8-201ENST00000403258 1108 ntBASIC17.83■□□□□ 0.44
FBXO28Q9NVF7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
FBXO28Q9NVF7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FBXO28Q9NVF7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
FBXO28Q9NVF7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FBXO28Q9NVF7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FBXO28Q9NVF7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.83■□□□□ 0.44
FBXO28Q9NVF7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FBXO28Q9NVF7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FBXO28Q9NVF7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FBXO28Q9NVF7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
FBXO28Q9NVF7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms