Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 KRT19P2-202ENST00000557173 1012 ntBASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 AL137784.3-201ENST00000623858 2288 ntBASIC17.96■□□□□ 0.47
LMBRD1Q9NUN5 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
LMBRD1Q9NUN5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 AC015656.1-201ENST00000624209 3578 ntBASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 FAM220BP-201ENST00000377689 816 ntBASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 AZGP1P1-201ENST00000411909 902 ntBASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 AL139010.1-201ENST00000454878 894 ntBASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 RNA5SP410-201ENST00000516285 106 ntBASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 RNA5SP415-201ENST00000517246 115 ntBASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 AC116407.3-201ENST00000623905 1129 ntBASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 AC079781.5-202ENST00000641784 3743 ntBASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMBRD1Q9NUN5 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 AC018442.1-201ENST00000421439 2061 ntBASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 AC092135.3-201ENST00000624151 1846 ntBASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 AP002472.1-201ENST00000577490 586 ntBASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LMBRD1Q9NUN5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms