Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 C2orf27AP3-201ENST00000434123 579 ntBASIC18.68■□□□□ 0.58
SALL1Q9NSC2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 AL354718.3-201ENST00000616414 581 ntBASIC18.68■□□□□ 0.58
SALL1Q9NSC2 CR382287.1-201ENST00000623954 586 ntBASIC18.68■□□□□ 0.58
SALL1Q9NSC2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 KRT8P35-201ENST00000483942 1338 ntBASIC18.68■□□□□ 0.58
SALL1Q9NSC2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 AC127383.1-201ENST00000444697 1800 ntBASIC18.68■□□□□ 0.58
SALL1Q9NSC2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SALL1Q9NSC2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 NUS1P3-201ENST00000423502 862 ntBASIC18.67■□□□□ 0.58
SALL1Q9NSC2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 AC008687.7-202ENST00000637404 953 ntBASIC18.67■□□□□ 0.58
SALL1Q9NSC2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SALL1Q9NSC2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 PPT1-215ENST00000641471 2368 ntBASIC18.66■□□□□ 0.58
SALL1Q9NSC2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 AC013268.4-201ENST00000637413 2228 ntBASIC18.66■□□□□ 0.58
SALL1Q9NSC2 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 RNU1-114P-201ENST00000365297 166 ntBASIC18.66■□□□□ 0.58
SALL1Q9NSC2 AC026954.1-201ENST00000429771 1293 ntBASIC18.66■□□□□ 0.58
SALL1Q9NSC2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 DUX4L45-201ENST00000566406 1057 ntBASIC18.66■□□□□ 0.58
SALL1Q9NSC2 AC145423.3-201ENST00000615987 467 ntBASIC18.66■□□□□ 0.58
SALL1Q9NSC2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 AC092850.2-201ENST00000623821 2697 ntBASIC18.66■□□□□ 0.58
SALL1Q9NSC2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms