Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 HNRNPUP1-201ENST00000554987 333 ntBASIC13.75□□□□□ -0.21
CDH20Q9HBT6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 AL844908.2-201ENST00000609461 460 ntBASIC13.75□□□□□ -0.21
CDH20Q9HBT6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 LINC02228-204ENST00000642115 2962 ntBASIC13.75□□□□□ -0.21
CDH20Q9HBT6 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 AC022144.1-201ENST00000602255 1580 ntBASIC13.75□□□□□ -0.21
CDH20Q9HBT6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 AP005117.1-202ENST00000581724 1908 ntBASIC13.74□□□□□ -0.21
CDH20Q9HBT6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 TSSK5P-201ENST00000423978 907 ntBASIC13.74□□□□□ -0.21
CDH20Q9HBT6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 AC044860.1-202ENST00000559481 777 ntBASIC13.74□□□□□ -0.21
CDH20Q9HBT6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 AC025048.3-201ENST00000590609 569 ntBASIC13.74□□□□□ -0.21
CDH20Q9HBT6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 AC074044.1-201ENST00000609673 707 ntBASIC13.74□□□□□ -0.21
CDH20Q9HBT6 AC005702.4-201ENST00000618393 416 ntBASIC13.74□□□□□ -0.21
CDH20Q9HBT6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 AL109936.8-201ENST00000641772 604 ntBASIC13.74□□□□□ -0.21
CDH20Q9HBT6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH20Q9HBT6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH20Q9HBT6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms