Protein–RNA interactions for Protein: Q9HB31

SEBOX, Homeobox protein SEBOX, humanhuman

Predicted RBP Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEBOXQ9HB31 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.38□□□□□ -0.27
SEBOXQ9HB31 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SEBOXQ9HB31 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
SEBOXQ9HB31 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEBOXQ9HB31 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
SEBOXQ9HB31 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SEBOXQ9HB31 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.38□□□□□ -0.27
SEBOXQ9HB31 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.38□□□□□ -0.27
SEBOXQ9HB31 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.38□□□□□ -0.27
SEBOXQ9HB31 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 AC009090.5-201ENST00000624886 2285 ntBASIC13.37□□□□□ -0.27
SEBOXQ9HB31 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 AC136604.1-201ENST00000418535 575 ntBASIC13.37□□□□□ -0.27
SEBOXQ9HB31 RBPMS2P1-201ENST00000437762 623 ntBASIC13.37□□□□□ -0.27
SEBOXQ9HB31 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 BANF1P1-201ENST00000553684 263 ntBASIC13.37□□□□□ -0.27
SEBOXQ9HB31 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SEBOXQ9HB31 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.36□□□□□ -0.27
SEBOXQ9HB31 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms