Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CCDC68Q9H2F9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 KRT18P13-201ENST00000400056 1290 ntBASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 SPDYE14P-201ENST00000442619 822 ntBASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 AC007967.4-201ENST00000614700 386 ntBASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC68Q9H2F9 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 AC144831.1-201ENST00000573312 2656 ntBASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 AC136621.1-201ENST00000624017 2304 ntBASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CCDC68Q9H2F9 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 GPS2P2-201ENST00000430745 888 ntBASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 MIR4313-201ENST00000580760 101 ntBASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms