Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 MT1JP-202ENST00000563395 408 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AC124283.4-201ENST00000581815 456 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AC104794.4-201ENST00000607181 446 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AL590282.1-201ENST00000610379 1136 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AC010998.3-201ENST00000613871 631 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AC103691.1-201ENST00000619654 520 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AC015908.5-201ENST00000623289 343 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AC092437.1-201ENST00000624794 1048 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 OR5AU1-204ENST00000641822 1197 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 GRIPAP1-201ENST00000376423 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 FAM173B-207ENST00000511437 1423 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AC106028.3-201ENST00000562894 1736 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 BLOC1S2-203ENST00000441611 2024 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AC011815.2-201ENST00000618230 2021 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 AF013593.1-201ENST00000458074 1487 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 BEND7-202ENST00000378605 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP3-3Q9BYR6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 MIPEPP2-201ENST00000422560 1819 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 RNU6-1251P-201ENST00000364502 107 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 SNORD115-48-201ENST00000364764 76 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 SH3BGR-204ENST00000380637 1014 ntTSL 3 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 CSF2RA-203ENST00000381500 1283 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 Y_RNA.472-201ENST00000384322 102 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC099791.1-201ENST00000416440 715 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AL355304.1-201ENST00000417650 554 ntTSL 3 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 MED14P1-201ENST00000430517 648 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC016723.1-202ENST00000436982 643 ntTSL 5 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AL606490.8-201ENST00000441624 319 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 MTND5P30-201ENST00000452896 1731 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AL356276.1-201ENST00000453692 758 ntTSL 3 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 OR5BH1P-201ENST00000454101 919 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC093010.2-201ENST00000481773 743 ntTSL 3 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC104108.1-201ENST00000509930 412 ntBASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC02163-201ENST00000514769 574 ntTSL 4 BASIC10.03□□□□□ -0.8
KRTAP3-3Q9BYR6 AC103833.1-201ENST00000517442 172 ntBASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms