Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 RPL13P2-201ENST00000440687 659 ntBASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 AC104596.2-201ENST00000512793 793 ntBASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 AL596325.1-201ENST00000563991 1082 ntBASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 RARRES2P5-201ENST00000564013 466 ntBASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 AC036164.1-201ENST00000570544 333 ntBASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 AC239800.4-201ENST00000603712 296 ntBASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 AC008494.3-201ENST00000606615 944 ntBASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 AC093726.1-201ENST00000608064 963 ntBASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 AL035252.4-201ENST00000624174 288 ntBASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.11□□□□□ -0.31
SSBP3Q9BWW4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 AC098614.1-201ENST00000368528 745 ntBASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 AP006294.1-201ENST00000415407 339 ntBASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 AC123567.1-201ENST00000548294 1261 ntBASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 CHCHD2P3-201ENST00000603038 451 ntBASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms