Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCGF1Q9BSM1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 AL035633.1-201ENST00000406139 838 ntBASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 FAM207CP-201ENST00000443486 507 ntBASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 AC004233.3-201ENST00000607794 1269 ntBASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 AL603832.2-201ENST00000566195 2125 ntBASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCGF1Q9BSM1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 MRPS18AP1-201ENST00000414458 589 ntBASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 AC009118.2-201ENST00000613275 655 ntBASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms