Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 AC097359.3-201ENST00000603982 1210 ntBASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 AC092902.6-201ENST00000641783 218 ntBASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 ZNF259P1-201ENST00000407656 1365 ntBASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 AC023274.1-201ENST00000418278 595 ntBASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 AL590627.1-203ENST00000421194 1026 ntBASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 ADH5P3-201ENST00000433842 1137 ntBASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 SPCS2P4-201ENST00000436160 681 ntBASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 KRT18P3-201ENST00000451602 1288 ntBASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 KRT8P48-201ENST00000515599 1220 ntBASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HDHD3Q9BSH5 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 AC232323.1-201ENST00000540724 2099 ntBASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 REXO1L5P-201ENST00000622260 2098 ntBASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 AL607033.1-201ENST00000623900 1599 ntBASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HDHD3Q9BSH5 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms