Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 LINC02084-201ENST00000606069 1096 ntBASIC14.63□□□□□ -0.07
TM9SF2Q99805 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.63□□□□□ -0.07
TM9SF2Q99805 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 RNA5SP410-201ENST00000516285 106 ntBASIC14.62□□□□□ -0.07
TM9SF2Q99805 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 AC024267.1-201ENST00000582320 895 ntBASIC14.62□□□□□ -0.07
TM9SF2Q99805 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 AL390955.2-201ENST00000603032 514 ntBASIC14.62□□□□□ -0.07
TM9SF2Q99805 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF2Q99805 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TM9SF2Q99805 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF2Q99805 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF2Q99805 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF2Q99805 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF2Q99805 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TM9SF2Q99805 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.61□□□□□ -0.07
TM9SF2Q99805 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF2Q99805 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF2Q99805 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF2Q99805 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.61□□□□□ -0.07
TM9SF2Q99805 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.61□□□□□ -0.07
TM9SF2Q99805 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TM9SF2Q99805 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF2Q99805 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF2Q99805 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF2Q99805 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF2Q99805 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF2Q99805 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.61□□□□□ -0.07
TM9SF2Q99805 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF2Q99805 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TM9SF2Q99805 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.61□□□□□ -0.07
TM9SF2Q99805 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.61□□□□□ -0.07
TM9SF2Q99805 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.61□□□□□ -0.07
TM9SF2Q99805 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.61□□□□□ -0.07
TM9SF2Q99805 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.61□□□□□ -0.07
TM9SF2Q99805 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.61□□□□□ -0.07
TM9SF2Q99805 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.61□□□□□ -0.07
TM9SF2Q99805 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF2Q99805 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms