Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCL19Q99731 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL19Q99731 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CCL19Q99731 AC138028.6-201ENST00000616106 1482 ntBASIC13.13□□□□□ -0.31
CCL19Q99731 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 RNU1-114P-201ENST00000365297 166 ntBASIC13.13□□□□□ -0.31
CCL19Q99731 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.13□□□□□ -0.31
CCL19Q99731 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCL19Q99731 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.13□□□□□ -0.31
CCL19Q99731 KLF2P2-201ENST00000416807 1039 ntBASIC13.13□□□□□ -0.31
CCL19Q99731 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
CCL19Q99731 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL19Q99731 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.13□□□□□ -0.31
CCL19Q99731 AC114812.1-204ENST00000449669 728 ntBASIC13.13□□□□□ -0.31
CCL19Q99731 AKR7A2P1-201ENST00000460134 915 ntBASIC13.13□□□□□ -0.31
CCL19Q99731 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.13□□□□□ -0.31
CCL19Q99731 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL19Q99731 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL19Q99731 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL19Q99731 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.13□□□□□ -0.31
CCL19Q99731 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.13□□□□□ -0.31
CCL19Q99731 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL19Q99731 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL19Q99731 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CCL19Q99731 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL19Q99731 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL19Q99731 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CCL19Q99731 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL19Q99731 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL19Q99731 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL19Q99731 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CCL19Q99731 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CCL19Q99731 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL19Q99731 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL19Q99731 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
CCL19Q99731 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL19Q99731 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
CCL19Q99731 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CCL19Q99731 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 NUS1P3-201ENST00000423502 862 ntBASIC13.12□□□□□ -0.31
CCL19Q99731 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL19Q99731 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL19Q99731 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.12□□□□□ -0.31
CCL19Q99731 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL19Q99731 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL19Q99731 RPSAP36-202ENST00000494591 1261 ntBASIC13.12□□□□□ -0.31
CCL19Q99731 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL19Q99731 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.12□□□□□ -0.31
CCL19Q99731 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL19Q99731 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL19Q99731 ACTG1P17-201ENST00000558391 1119 ntBASIC13.12□□□□□ -0.31
CCL19Q99731 RN7SL48P-201ENST00000579283 293 ntBASIC13.12□□□□□ -0.31
CCL19Q99731 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL19Q99731 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCL19Q99731 AC106872.11-201ENST00000605838 421 ntBASIC13.12□□□□□ -0.31
CCL19Q99731 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL19Q99731 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CCL19Q99731 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL19Q99731 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CCL19Q99731 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CCL19Q99731 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL19Q99731 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL19Q99731 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL19Q99731 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms